Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1827
Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,228,864 | - | DvMF_1826 | 0.37 | +0.1 | |
2,228,891 | + | DvMF_1826 | 0.39 | +0.3 | |
2,228,994 | - | DvMF_1826 | 0.50 | +1.1 | |
2,229,176 | - | DvMF_1826 | 0.68 | +0.3 | |
2,229,273 | + | DvMF_1826 | 0.77 | -0.2 | |
2,229,385 | + | DvMF_1826 | 0.89 | +0.2 | |
2,229,406 | - | -2.3 | |||
2,229,665 | + | DvMF_1827 | 0.18 | +0.6 | |
2,229,761 | - | DvMF_1827 | 0.28 | -0.1 | |
2,229,962 | - | DvMF_1827 | 0.50 | +0.1 | |
2,230,161 | - | DvMF_1827 | 0.72 | +0.1 | |
2,230,328 | + | DvMF_1827 | 0.90 | -0.0 | |
2,230,472 | - | +0.0 | |||
2,230,607 | + | DvMF_1828 | 0.19 | +0.0 | |
2,230,701 | - | DvMF_1828 | 0.28 | -0.7 | |
2,230,719 | + | DvMF_1828 | 0.30 | -0.1 | |
2,230,719 | + | DvMF_1828 | 0.30 | +1.1 | |
2,230,719 | + | DvMF_1828 | 0.30 | -0.3 | |
2,230,727 | - | DvMF_1828 | 0.31 | +0.3 |
Or see this region's nucleotide sequence