Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1494
Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,835,333 | + | DvMF_1493 | 0.90 | -0.2 | |
1,835,352 | - | -1.4 | |||
1,836,257 | + | -0.4 | |||
1,836,327 | + | -0.6 | |||
1,836,416 | + | DvMF_1494 | 0.11 | -0.3 | |
1,836,490 | + | DvMF_1494 | 0.16 | -0.4 | |
1,836,498 | - | DvMF_1494 | 0.17 | -0.8 | |
1,836,498 | - | DvMF_1494 | 0.17 | -0.2 | |
1,836,498 | - | DvMF_1494 | 0.17 | -0.0 | |
1,836,532 | - | DvMF_1494 | 0.19 | -0.8 | |
1,836,700 | + | DvMF_1494 | 0.32 | -0.9 | |
1,836,728 | + | DvMF_1494 | 0.34 | -1.6 | |
1,836,986 | + | DvMF_1494 | 0.53 | +0.1 | |
1,836,996 | + | DvMF_1494 | 0.54 | -0.4 | |
1,837,211 | - | DvMF_1494 | 0.70 | -0.6 | |
1,837,397 | - | DvMF_1494 | 0.83 | -0.2 | |
1,837,732 | + | -0.3 | |||
1,837,818 | + | -0.9 | |||
1,837,902 | - | -0.7 | |||
1,837,921 | + | -0.6 | |||
1,837,929 | - | -0.9 | |||
1,837,950 | + | -0.7 | |||
1,838,074 | - | -0.7 | |||
1,838,122 | + | -0.7 | |||
1,838,207 | + | -0.6 | |||
1,838,314 | - | +1.1 | |||
1,838,349 | - | -0.1 | |||
1,838,364 | - | -0.0 | |||
1,838,414 | + | +0.3 | |||
1,838,575 | - | -1.3 | |||
1,838,599 | - | -1.1 |
Or see this region's nucleotide sequence