Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0769 and DvMF_0770 overlap by 4 nucleotides DvMF_0770 and DvMF_0771 are separated by 55 nucleotides DvMF_0771 and DvMF_0772 are separated by 71 nucleotides
DvMF_0769: DvMF_0769 - metal dependent phosphohydrolase (RefSeq), at 922,774 to 923,613
_0769
DvMF_0770: DvMF_0770 - hypothetical protein (RefSeq), at 923,610 to 924,104
_0770
DvMF_0771: DvMF_0771 - DNA protecting protein DprA (RefSeq), at 924,160 to 925,821
_0771
DvMF_0772: DvMF_0772 - tol-pal system protein YbgF (RefSeq), at 925,893 to 926,750
_0772
Position (kb) 924
925
926 Strain fitness (log2 ratio) -1
0
1 at 923.258 kb on + strand, within DvMF_0769 at 923.519 kb on - strand, within DvMF_0769 at 923.845 kb on - strand, within DvMF_0770 at 923.974 kb on + strand, within DvMF_0770 at 924.197 kb on + strand at 924.237 kb on + strand at 924.307 kb on + strand at 924.342 kb on + strand, within DvMF_0771 at 924.844 kb on + strand, within DvMF_0771 at 925.136 kb on + strand, within DvMF_0771 at 925.427 kb on - strand, within DvMF_0771 at 925.514 kb on + strand, within DvMF_0771 at 926.017 kb on + strand, within DvMF_0772 at 926.127 kb on - strand, within DvMF_0772 at 926.275 kb on + strand, within DvMF_0772 at 926.307 kb on - strand, within DvMF_0772 at 926.307 kb on - strand, within DvMF_0772 at 926.344 kb on + strand, within DvMF_0772 at 926.641 kb on + strand, within DvMF_0772 at 926.646 kb on + strand, within DvMF_0772 at 926.658 kb on + strand, within DvMF_0772 at 926.733 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.125 mg/ml remove 923,258 + DvMF_0769 0.58 +0.6 923,519 - DvMF_0769 0.89 -0.6 923,845 - DvMF_0770 0.47 -0.4 923,974 + DvMF_0770 0.74 -0.6 924,197 + +0.6 924,237 + +0.2 924,307 + -0.8 924,342 + DvMF_0771 0.11 -1.3 924,844 + DvMF_0771 0.41 -0.5 925,136 + DvMF_0771 0.59 -0.8 925,427 - DvMF_0771 0.76 -0.9 925,514 + DvMF_0771 0.81 -0.5 926,017 + DvMF_0772 0.14 -0.6 926,127 - DvMF_0772 0.27 -0.5 926,275 + DvMF_0772 0.45 -0.8 926,307 - DvMF_0772 0.48 -0.5 926,307 - DvMF_0772 0.48 -0.2 926,344 + DvMF_0772 0.53 -1.0 926,641 + DvMF_0772 0.87 -0.4 926,646 + DvMF_0772 0.88 -0.1 926,658 + DvMF_0772 0.89 -0.6 926,733 + -0.3
Or see this region's nucleotide sequence