Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2566

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,644,795	+				+0.0
2,644,795	+				-0.2
2,645,387	+				-3.0
2,645,448	-				-0.2
2,645,448	-				-1.8
2,645,469	+				-1.1
2,645,477	-				+1.6
2,645,495	+				-3.0
2,645,535	-				-1.1
2,645,535	-				-1.2
2,645,590	-				-1.6
2,645,671	+				-0.5
2,645,751	-	ppiB	Synpcc7942_2566	0.21	-2.7
2,645,779	+				-0.5
2,645,878	+	ppiB	Synpcc7942_2566	0.32	-1.5
2,645,923	+	ppiB	Synpcc7942_2566	0.37	-0.8
2,646,124	-				+1.0
2,646,136	-	ppiB	Synpcc7942_2566	0.56	+1.0
2,646,184	-	ppiB	Synpcc7942_2566	0.60	-2.3
2,646,264	-	ppiB	Synpcc7942_2566	0.68	-0.6
2,646,423	-	ppiB	Synpcc7942_2566	0.82	-1.5
2,646,459	-	ppiB	Synpcc7942_2566	0.85	+1.2
2,646,526	+				-0.3
2,646,534	-				+0.3
2,646,574	+				+2.9
2,646,581	-				+1.0
2,646,615	+				-0.2
2,646,622	-				-0.7
2,646,622	-				-0.4
2,647,618	-				-0.3