Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2559

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,636,800	+	nifS	Synpcc7942_2558	0.24	+1.8
2,636,802	-	nifS	Synpcc7942_2558	0.24	+1.9
2,636,810	-	nifS	Synpcc7942_2558	0.25	-0.9
2,636,989	-	nifS	Synpcc7942_2558	0.40	+0.6
2,637,125	+	nifS	Synpcc7942_2558	0.52	+1.0
2,637,140	-	nifS	Synpcc7942_2558	0.53	+2.6
2,637,188	-	nifS	Synpcc7942_2558	0.57	+1.9
2,637,269	+	nifS	Synpcc7942_2558	0.64	+2.3
2,637,316	-	nifS	Synpcc7942_2558	0.68	+1.9
2,637,419	+	nifS	Synpcc7942_2558	0.77	+1.6
2,637,577	+				+0.5
2,637,639	+				+0.1
2,637,697	-				-1.6
2,637,699	+				+0.5
2,637,703	+				-1.2
2,637,713	-				+1.2
2,637,727	+				+1.0
2,637,784	+	rplI	Synpcc7942_2559	0.12	+4.3
2,637,792	-	rplI	Synpcc7942_2559	0.14	+1.7
2,637,833	-	rplI	Synpcc7942_2559	0.22	+1.1
2,637,924	-	rplI	Synpcc7942_2559	0.42	+1.9
2,638,050	+	rplI	Synpcc7942_2559	0.70	+1.9
2,638,058	-	rplI	Synpcc7942_2559	0.71	+1.4
2,638,069	+	rplI	Synpcc7942_2559	0.74	+1.8
2,638,076	+	rplI	Synpcc7942_2559	0.75	+2.5
2,638,077	-	rplI	Synpcc7942_2559	0.76	+1.3
2,638,077	-	rplI	Synpcc7942_2559	0.76	+1.4
2,638,083	-	rplI	Synpcc7942_2559	0.77	+2.9
2,638,115	+	rplI	Synpcc7942_2559	0.84	-1.9
2,638,152	+				-0.1
2,638,198	+				+1.9
2,638,217	+				+2.2
2,638,220	-				+2.4
2,638,235	+				+0.4
2,638,253	-				-1.0
2,638,253	-				+1.0
2,638,266	+				+1.5
2,638,353	-				+2.5
2,638,363	+				+1.6
2,638,366	-				+3.4
2,638,376	-				+2.0
2,638,381	-				+2.3
2,638,381	-				+0.8
2,638,433	-				+0.9
2,638,479	-				+0.5
2,638,480	+				+1.6
2,638,493	-				+0.6
2,638,504	+				+1.0
2,638,512	-				+0.5
2,638,623	+		Synpcc7942_2560	0.26	+2.2
2,638,646	-		Synpcc7942_2560	0.30	+1.6
2,638,668	-		Synpcc7942_2560	0.34	-0.5
2,638,680	-		Synpcc7942_2560	0.36	-0.0
2,638,750	+		Synpcc7942_2560	0.49	+1.1
2,638,787	+		Synpcc7942_2560	0.55	+0.7
2,638,792	+		Synpcc7942_2560	0.56	-1.0
2,638,822	-		Synpcc7942_2560	0.62	+0.9
2,638,825	+		Synpcc7942_2560	0.62	+1.4
2,638,833	-		Synpcc7942_2560	0.64	+1.0
2,638,833	-		Synpcc7942_2560	0.64	+1.2
2,638,853	-		Synpcc7942_2560	0.67	-1.3
2,638,858	-		Synpcc7942_2560	0.68	+0.8
2,638,900	-		Synpcc7942_2560	0.76	+0.8
2,638,939	+		Synpcc7942_2560	0.83	-2.3
2,638,939	+		Synpcc7942_2560	0.83	+0.0
2,638,939	+		Synpcc7942_2560	0.83	-0.0
2,638,942	-		Synpcc7942_2560	0.83	-1.4
2,638,942	-		Synpcc7942_2560	0.83	-1.5
2,638,942	-		Synpcc7942_2560	0.83	+1.0
2,638,944	+		Synpcc7942_2560	0.83	-1.7
2,638,949	+		Synpcc7942_2560	0.84	+0.0
2,638,949	+		Synpcc7942_2560	0.84	+1.0
2,638,949	+		Synpcc7942_2560	0.84	+0.1
2,638,949	+		Synpcc7942_2560	0.84	+0.6
2,638,957	-		Synpcc7942_2560	0.86	+0.5
2,638,957	-		Synpcc7942_2560	0.86	+0.7
2,638,957	-		Synpcc7942_2560	0.86	+0.2
2,638,985	+				+0.6
2,638,993	-				+1.7
2,639,029	-				-0.5
2,639,039	-				-1.8
2,639,039	-				+1.4
2,639,062	-				-0.2
2,639,108	-				+2.4
2,639,121	+				+0.4
2,639,129	-				+0.1