Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2517

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,596,065	-		Synpcc7942_2515	0.83	+0.9
2,596,088	+		Synpcc7942_2515	0.84	+0.6
2,596,103	-		Synpcc7942_2515	0.84	-1.8
2,596,112	-		Synpcc7942_2515	0.85	+0.7
2,596,122	-		Synpcc7942_2515	0.85	-1.2
2,596,125	+		Synpcc7942_2515	0.85	-1.3
2,596,151	+		Synpcc7942_2515	0.86	+1.5
2,596,157	+		Synpcc7942_2515	0.87	+2.1
2,596,158	-		Synpcc7942_2515	0.87	-0.2
2,596,159	-		Synpcc7942_2515	0.87	-0.7
2,596,159	-		Synpcc7942_2515	0.87	-1.0
2,596,165	-		Synpcc7942_2515	0.87	+1.1
2,596,174	-		Synpcc7942_2515	0.87	-0.4
2,596,225	+		Synpcc7942_2515	0.90	-0.5
2,596,225	+		Synpcc7942_2515	0.90	-1.8
2,596,225	+		Synpcc7942_2515	0.90	-1.3
2,596,225	+		Synpcc7942_2515	0.90	+0.2
2,596,225	+		Synpcc7942_2515	0.90	-0.4
2,596,225	+		Synpcc7942_2515	0.90	-0.0
2,596,225	+		Synpcc7942_2515	0.90	-0.2
2,596,225	+		Synpcc7942_2515	0.90	+0.5
2,596,225	+		Synpcc7942_2515	0.90	-0.2
2,596,233	-				+0.6
2,596,233	-				-0.7
2,596,233	-				+0.3
2,596,233	-				+0.4
2,596,233	-				-0.2
2,596,233	-				-0.2
2,596,233	-				+1.3
2,596,247	+				-0.3
2,596,257	+				-0.4
2,596,257	-				+0.5
2,596,267	+				+0.8
2,596,291	+				-0.2
2,596,291	+				-0.2
2,596,299	-				-0.4
2,596,299	-				-2.1
2,596,340	+				-0.5
2,596,345	+				+0.7
2,596,348	-				+0.4
2,596,449	-				+1.1
2,596,483	-				+0.5
2,596,485	+				+0.4
2,596,485	-				+0.7
2,596,485	-				+0.4
2,596,503	-				+0.5
2,596,517	-				+0.8
2,596,522	-				+0.7
2,596,594	-	tRNA-Ala	Synpcc7942_R0018	0.14	+1.3
2,596,728	+				+0.3
2,596,823	+		Synpcc7942_2516	0.43	+0.9
2,596,834	+		Synpcc7942_2516	0.48	-0.1
2,596,862	-		Synpcc7942_2516	0.60	-1.0
2,596,869	+		Synpcc7942_2516	0.62	-0.2
2,596,887	-		Synpcc7942_2516	0.70	-0.0
2,596,901	+		Synpcc7942_2516	0.76	-0.1
2,596,982	-				+0.4
2,596,985	+				-0.5
2,596,986	+				-0.4
2,596,993	-				-0.3
2,596,993	-				+0.3
2,596,993	-				-1.1
2,596,993	-				-1.3
2,597,001	+				-0.9
2,597,001	-				-1.9
2,597,008	+				+0.9
2,597,008	+				-0.1
2,597,008	+				+0.3
2,597,013	+				-0.2
2,597,018	+				+1.0
2,597,021	-				+0.3
2,597,077	+				-0.6
2,597,141	-		Synpcc7942_2517	0.16	-2.2
2,597,144	+		Synpcc7942_2517	0.16	-0.5
2,597,183	+		Synpcc7942_2517	0.22	+0.1
2,597,183	+		Synpcc7942_2517	0.22	-1.0
2,597,216	+		Synpcc7942_2517	0.26	-1.1
2,597,272	-		Synpcc7942_2517	0.34	-1.4
2,597,287	+		Synpcc7942_2517	0.37	-0.6
2,597,427	+		Synpcc7942_2517	0.57	-2.6
2,597,454	+				-1.1
2,597,459	+		Synpcc7942_2517	0.61	-0.7
2,597,467	-		Synpcc7942_2517	0.62	-2.9
2,597,478	+		Synpcc7942_2517	0.64	-2.5
2,597,535	+		Synpcc7942_2517	0.72	-0.4
2,597,535	+		Synpcc7942_2517	0.72	-1.3
2,597,535	+		Synpcc7942_2517	0.72	-2.7
2,597,543	-		Synpcc7942_2517	0.73	-1.5
2,597,543	-		Synpcc7942_2517	0.73	+0.2
2,597,554	+		Synpcc7942_2517	0.75	+0.2
2,597,558	-		Synpcc7942_2517	0.75	-0.7
2,597,599	-		Synpcc7942_2517	0.81	-2.1
2,597,724	+				+0.2
2,597,732	-				+0.5
2,597,732	-				+0.0
2,597,748	+				-0.9
2,597,762	+				+1.3
2,597,778	-				+0.8
2,597,783	-				+2.2
2,597,794	+				+1.2
2,597,794	+				+1.7
2,597,794	+				+1.5
2,597,794	+				-0.8
2,597,794	+				+2.0
2,597,794	+				+1.9
2,597,795	-				+2.5
2,597,802	-				+1.3
2,597,811	+				-2.5
2,597,916	+	glgA	Synpcc7942_2518	0.12	-1.8
2,598,471	+	glgA	Synpcc7942_2518	0.52	+1.8
2,598,589	+	glgA	Synpcc7942_2518	0.60	-2.7
2,598,707	-	glgA	Synpcc7942_2518	0.68	-3.0