Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2504

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,585,471	+				+0.4
2,585,473	+				-2.4
2,585,481	-				-0.3
2,585,481	-				+0.6
2,585,507	+				-0.4
2,585,509	+				+0.7
2,585,536	+				-0.7
2,585,552	+				-0.2
2,585,609	+				-1.3
2,585,617	-				-0.4
2,585,634	-				-0.7
2,585,666	+				-1.0
2,585,672	+				+0.9
2,585,674	-				+0.2
2,585,683	+				+1.3
2,585,683	+				+1.0
2,585,683	+				+0.5
2,585,691	-				+0.3
2,585,691	-				-0.9
2,585,706	-				-2.1
2,585,735	-		Synpcc7942_2504	0.17	-2.9
2,585,739	+		Synpcc7942_2504	0.18	-1.1
2,585,754	-		Synpcc7942_2504	0.21	-1.3
2,585,792	+		Synpcc7942_2504	0.31	-0.2
2,585,792	+		Synpcc7942_2504	0.31	-0.8
2,585,800	-		Synpcc7942_2504	0.33	-1.3
2,585,800	-		Synpcc7942_2504	0.33	-1.9
2,585,868	+		Synpcc7942_2504	0.49	-2.9
2,585,930	+		Synpcc7942_2504	0.65	-2.1
2,585,945	+		Synpcc7942_2504	0.68	+0.0
2,585,945	+		Synpcc7942_2504	0.68	-1.6
2,585,945	+		Synpcc7942_2504	0.68	-1.6
2,585,946	-		Synpcc7942_2504	0.69	-1.7
2,586,010	+		Synpcc7942_2504	0.84	-2.1
2,586,015	+		Synpcc7942_2504	0.86	-2.3
2,586,023	-		Synpcc7942_2504	0.88	-2.0
2,586,024	-		Synpcc7942_2504	0.88	+0.6
2,586,074	+				+0.7
2,586,098	+				-0.3
2,586,244	+		Synpcc7942_2505	0.17	-0.2
2,586,249	+		Synpcc7942_2505	0.18	+0.1
2,586,257	-		Synpcc7942_2505	0.19	-1.7
2,586,297	+		Synpcc7942_2505	0.25	-0.8
2,586,297	+		Synpcc7942_2505	0.25	-0.1
2,586,306	+		Synpcc7942_2505	0.27	-0.5
2,586,316	-		Synpcc7942_2505	0.28	-1.1
2,586,325	-		Synpcc7942_2505	0.30	+0.5
2,586,325	-		Synpcc7942_2505	0.30	+0.2
2,586,325	-		Synpcc7942_2505	0.30	-0.7
2,586,327	+		Synpcc7942_2505	0.30	-0.9
2,586,339	+		Synpcc7942_2505	0.32	+0.6
2,586,342	-		Synpcc7942_2505	0.32	-0.1
2,586,372	+		Synpcc7942_2505	0.37	-2.1
2,586,416	+		Synpcc7942_2505	0.44	-0.2
2,586,452	+		Synpcc7942_2505	0.49	+0.2
2,586,460	-		Synpcc7942_2505	0.50	-0.3
2,586,472	-		Synpcc7942_2505	0.52	+0.4
2,586,497	+		Synpcc7942_2505	0.56	+1.2
2,586,497	+		Synpcc7942_2505	0.56	-2.2
2,586,517	-		Synpcc7942_2505	0.59	+0.4
2,586,576	+		Synpcc7942_2505	0.68	-1.3
2,586,576	+		Synpcc7942_2505	0.68	+1.5
2,586,633	+		Synpcc7942_2505	0.77	+0.1
2,586,633	+		Synpcc7942_2505	0.77	+0.2
2,586,641	-		Synpcc7942_2505	0.78	+0.6
2,586,641	-		Synpcc7942_2505	0.78	-0.3
2,586,641	-		Synpcc7942_2505	0.78	+0.3
2,586,646	-		Synpcc7942_2505	0.79	-1.4
2,586,646	-		Synpcc7942_2505	0.79	+1.5
2,586,680	+		Synpcc7942_2505	0.84	+0.2
2,586,680	+		Synpcc7942_2505	0.84	+0.2
2,586,688	-		Synpcc7942_2505	0.85	+0.6
2,586,737	+				+0.3
2,586,740	-				-0.4
2,586,756	+				+0.5