Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2350

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,416,593	-	pilT	Synpcc7942_2349	0.17	+0.3
2,416,600	-	pilT	Synpcc7942_2349	0.18	-0.9
2,416,617	+	pilT	Synpcc7942_2349	0.19	+0.3
2,416,692	-	pilT	Synpcc7942_2349	0.26	+0.4
2,416,704	-	pilT	Synpcc7942_2349	0.27	-0.0
2,416,720	+	pilT	Synpcc7942_2349	0.28	+0.2
2,416,726	+	pilT	Synpcc7942_2349	0.28	-0.0
2,416,728	-	pilT	Synpcc7942_2349	0.29	+1.8
2,416,741	+				+0.6
2,416,741	+				-0.6
2,416,749	-	pilT	Synpcc7942_2349	0.30	-0.6
2,416,767	+	pilT	Synpcc7942_2349	0.32	+0.3
2,416,801	+				-0.3
2,416,819	-	pilT	Synpcc7942_2349	0.36	-1.1
2,416,819	-	pilT	Synpcc7942_2349	0.36	-0.4
2,416,824	+	pilT	Synpcc7942_2349	0.37	+0.6
2,416,872	+	pilT	Synpcc7942_2349	0.41	-0.7
2,416,892	+	pilT	Synpcc7942_2349	0.42	-0.3
2,416,892	-	pilT	Synpcc7942_2349	0.42	+0.6
2,416,896	+	pilT	Synpcc7942_2349	0.43	-1.6
2,416,896	+	pilT	Synpcc7942_2349	0.43	-0.9
2,416,902	+	pilT	Synpcc7942_2349	0.43	+0.4
2,416,937	-	pilT	Synpcc7942_2349	0.46	-0.9
2,416,992	-	pilT	Synpcc7942_2349	0.51	-1.3
2,417,044	-	pilT	Synpcc7942_2349	0.55	-1.4
2,417,059	+	pilT	Synpcc7942_2349	0.56	-1.3
2,417,151	+	pilT	Synpcc7942_2349	0.64	+0.3
2,417,171	-	pilT	Synpcc7942_2349	0.66	+0.8
2,417,187	+	pilT	Synpcc7942_2349	0.67	+0.0
2,417,208	+	pilT	Synpcc7942_2349	0.69	-1.0
2,417,208	-	pilT	Synpcc7942_2349	0.69	-1.1
2,417,311	-	pilT	Synpcc7942_2349	0.77	+0.2
2,417,386	+	pilT	Synpcc7942_2349	0.84	-0.4
2,417,526	+				+0.3
2,417,540	+				+1.0
2,417,562	+				-0.2
2,417,574	+				-1.1
2,417,590	+				+0.8
2,417,598	-				+0.3
2,417,619	+				-2.3
2,417,627	-				+0.4
2,417,627	-				-1.4
2,417,627	-				-1.2
2,417,642	+				-1.8
2,417,643	-				+0.4
2,417,660	-				+0.4
2,417,677	+		Synpcc7942_2350	0.12	-0.1
2,417,677	+		Synpcc7942_2350	0.12	-0.4
2,417,685	-		Synpcc7942_2350	0.13	-1.1
2,417,687	+		Synpcc7942_2350	0.13	-0.9
2,417,706	+		Synpcc7942_2350	0.16	-1.3
2,417,774	+		Synpcc7942_2350	0.26	-1.0
2,417,775	+		Synpcc7942_2350	0.26	-0.5
2,417,782	-		Synpcc7942_2350	0.27	-0.6
2,417,824	+		Synpcc7942_2350	0.33	-0.8
2,417,832	-		Synpcc7942_2350	0.34	-1.0
2,417,832	-		Synpcc7942_2350	0.34	-1.9
2,417,859	-		Synpcc7942_2350	0.38	-2.4
2,417,984	-		Synpcc7942_2350	0.56	-4.7
2,418,002	+		Synpcc7942_2350	0.58	-2.1
2,418,002	+		Synpcc7942_2350	0.58	-1.6
2,418,002	-		Synpcc7942_2350	0.58	-2.3
2,418,010	-		Synpcc7942_2350	0.59	-0.9
2,418,058	+		Synpcc7942_2350	0.66	-0.9
2,418,066	-		Synpcc7942_2350	0.67	-0.3
2,418,098	-		Synpcc7942_2350	0.72	-0.6
2,418,098	-		Synpcc7942_2350	0.72	-0.5
2,418,100	-		Synpcc7942_2350	0.72	-0.6
2,418,131	-		Synpcc7942_2350	0.77	-0.2
2,418,140	-		Synpcc7942_2350	0.78	-0.2
2,418,140	-		Synpcc7942_2350	0.78	-1.5
2,418,142	+		Synpcc7942_2350	0.78	-1.6
2,418,142	+		Synpcc7942_2350	0.78	-0.5
2,418,157	+		Synpcc7942_2350	0.80	-0.9
2,418,165	-		Synpcc7942_2350	0.81	-0.2
2,418,192	-		Synpcc7942_2350	0.85	-1.5
2,418,202	+		Synpcc7942_2350	0.87	+0.3
2,418,202	-		Synpcc7942_2350	0.87	-2.3
2,418,233	-				-1.3
2,418,233	-				-2.4
2,418,247	+				-1.3
2,418,255	-				-1.9
2,418,263	-				-0.7
2,418,263	-				-2.3
2,418,265	+				+1.0
2,418,265	+				-1.3
2,418,265	+				-1.7
2,418,273	-				-1.3
2,418,291	+				+0.3
2,418,291	+				+0.1
2,418,306	-				-0.8
2,418,714	-		Synpcc7942_2351	0.33	+1.6
2,419,052	-		Synpcc7942_2351	0.61	-0.4
2,419,053	+		Synpcc7942_2351	0.61	-1.6
2,419,118	+		Synpcc7942_2351	0.67	-2.8