Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2347

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,413,217	+				-1.0
2,413,291	-				-3.6
2,413,305	+				+1.2
2,413,327	+				-0.7
2,413,327	+				-0.5
2,413,327	+				-0.6
2,413,327	+				-0.6
2,413,327	+				-2.4
2,413,335	-				+0.6
2,413,335	-				+0.8
2,413,335	-				-1.6
2,413,335	-				+0.3
2,413,335	-				-0.2
2,413,335	-				-0.3
2,413,338	-				+0.3
2,413,340	+				-0.3
2,413,341	+				-0.5
2,413,351	+				-0.2
2,413,354	+				+0.2
2,413,356	-				-0.1
2,413,359	-				-0.4
2,413,359	-				+1.4
2,413,359	-				+1.2
2,413,364	+				-0.2
2,413,364	+				-0.5
2,413,364	+				+0.3
2,414,120	+				-0.7
2,414,120	+				+0.9
2,414,138	-				-1.0
2,414,138	-				-0.2
2,414,138	-				-0.4
2,414,151	+				+4.1
2,414,193	-				+4.0
2,414,202	+				+2.2
2,414,251	-		Synpcc7942_2347	0.10	+3.9
2,414,251	-		Synpcc7942_2347	0.10	+2.1
2,414,251	-		Synpcc7942_2347	0.10	+4.1
2,414,251	-		Synpcc7942_2347	0.10	+3.3
2,414,266	+		Synpcc7942_2347	0.12	+3.5
2,414,266	+		Synpcc7942_2347	0.12	+3.0
2,414,301	+		Synpcc7942_2347	0.15	+4.2
2,414,301	+				+3.8
2,414,309	-		Synpcc7942_2347	0.16	+3.5
2,414,336	+		Synpcc7942_2347	0.18	+3.9
2,414,361	+		Synpcc7942_2347	0.21	+3.8
2,414,361	+				+3.8
2,414,365	+		Synpcc7942_2347	0.21	+4.1
2,414,365	+		Synpcc7942_2347	0.21	+4.0
2,414,369	-		Synpcc7942_2347	0.21	+4.3
2,414,462	+				+3.4
2,414,522	+		Synpcc7942_2347	0.36	+4.3
2,414,530	-		Synpcc7942_2347	0.36	+4.3
2,414,552	+		Synpcc7942_2347	0.38	+3.8
2,414,616	+		Synpcc7942_2347	0.44	+4.0
2,414,644	+				+3.8
2,414,679	+		Synpcc7942_2347	0.50	+3.5
2,414,679	+		Synpcc7942_2347	0.50	+3.1
2,414,679	+		Synpcc7942_2347	0.50	+2.7
2,414,681	+		Synpcc7942_2347	0.50	+3.3
2,414,681	+		Synpcc7942_2347	0.50	+3.8
2,414,699	-		Synpcc7942_2347	0.52	+4.1
2,414,734	+		Synpcc7942_2347	0.55	+4.4
2,414,737	+		Synpcc7942_2347	0.56	+3.8
2,414,742	-		Synpcc7942_2347	0.56	+3.4
2,414,742	-		Synpcc7942_2347	0.56	+3.5
2,414,788	+		Synpcc7942_2347	0.60	+3.9
2,414,788	+		Synpcc7942_2347	0.60	+4.0
2,414,806	+		Synpcc7942_2347	0.62	+3.1
2,414,806	+		Synpcc7942_2347	0.62	+4.4
2,414,821	-		Synpcc7942_2347	0.63	+3.8
2,414,837	+		Synpcc7942_2347	0.65	+3.8
2,414,861	+		Synpcc7942_2347	0.67	+3.3
2,414,895	+		Synpcc7942_2347	0.70	+3.3
2,414,912	+				+4.2
2,414,912	+		Synpcc7942_2347	0.72	+4.0
2,414,912	+		Synpcc7942_2347	0.72	+3.8
2,414,920	-		Synpcc7942_2347	0.73	+4.7
2,414,920	-		Synpcc7942_2347	0.73	+4.3
2,414,920	-		Synpcc7942_2347	0.73	+4.2
2,414,920	-		Synpcc7942_2347	0.73	+3.3
2,414,958	-		Synpcc7942_2347	0.76	+3.5
2,414,963	+		Synpcc7942_2347	0.77	+4.1
2,414,976	+		Synpcc7942_2347	0.78	+4.1
2,414,976	-		Synpcc7942_2347	0.78	+3.8
2,415,003	+		Synpcc7942_2347	0.80	+4.3
2,415,011	-		Synpcc7942_2347	0.81	+3.6
2,415,016	-		Synpcc7942_2347	0.82	+4.2
2,415,039	-		Synpcc7942_2347	0.84	+3.9
2,415,050	-		Synpcc7942_2347	0.85	+3.7
2,415,050	-		Synpcc7942_2347	0.85	+3.6
2,415,055	-		Synpcc7942_2347	0.85	+3.6
2,415,085	-		Synpcc7942_2347	0.88	+3.8
2,415,089	+		Synpcc7942_2347	0.88	+0.7
2,415,097	-		Synpcc7942_2347	0.89	+3.6
2,415,097	-		Synpcc7942_2347	0.89	+3.7
2,415,097	-		Synpcc7942_2347	0.89	+3.4
2,415,123	+				+0.2
2,415,123	+				-0.2
2,415,131	-				-0.3
2,415,140	+				+1.0
2,415,202	+				+0.0
2,415,210	-				+1.5
2,415,210	-				+0.8
2,415,210	-				+1.4
2,415,210	-				-0.6
2,415,216	+				+2.4
2,415,240	+				+1.4
2,415,248	-				+1.0
2,415,248	-				+2.3
2,415,288	+				-0.7
2,415,302	+				+0.1
2,415,302	+				+1.5
2,415,302	+				-0.4
2,415,302	+				+0.9
2,415,309	+				-0.2
2,415,310	-				+1.0
2,415,310	-				-1.2
2,415,317	-				+3.3
2,415,344	+	queA	Synpcc7942_2348	0.10	+1.8
2,415,439	+	queA	Synpcc7942_2348	0.19	+1.2
2,415,447	-	queA	Synpcc7942_2348	0.20	+1.0
2,415,447	-	queA	Synpcc7942_2348	0.20	+0.3
2,415,447	-	queA	Synpcc7942_2348	0.20	+0.1
2,415,447	-	queA	Synpcc7942_2348	0.20	+2.4
2,415,455	-	queA	Synpcc7942_2348	0.21	+1.4
2,415,487	+	queA	Synpcc7942_2348	0.24	+1.9
2,415,531	-	queA	Synpcc7942_2348	0.28	+1.8
2,415,564	-	queA	Synpcc7942_2348	0.31	+1.3
2,415,579	+	queA	Synpcc7942_2348	0.32	+1.8
2,415,579	+	queA	Synpcc7942_2348	0.32	+1.2
2,415,579	+	queA	Synpcc7942_2348	0.32	+0.4
2,415,587	-	queA	Synpcc7942_2348	0.33	+0.1
2,415,648	+	queA	Synpcc7942_2348	0.38	+1.8
2,415,682	+	queA	Synpcc7942_2348	0.42	+1.6
2,415,694	+	queA	Synpcc7942_2348	0.43	+1.9
2,415,703	+	queA	Synpcc7942_2348	0.44	-0.5
2,415,725	+	queA	Synpcc7942_2348	0.46	-0.1
2,415,731	+	queA	Synpcc7942_2348	0.46	+0.7
2,415,731	+	queA	Synpcc7942_2348	0.46	+2.0
2,415,734	-	queA	Synpcc7942_2348	0.46	+1.4
2,415,750	+	queA	Synpcc7942_2348	0.48	+0.9
2,415,750	+	queA	Synpcc7942_2348	0.48	+1.6
2,415,770	+	queA	Synpcc7942_2348	0.50	-0.8
2,415,770	+	queA	Synpcc7942_2348	0.50	+2.0
2,415,770	+	queA	Synpcc7942_2348	0.50	+0.5
2,415,778	-	queA	Synpcc7942_2348	0.50	+1.6
2,415,778	-	queA	Synpcc7942_2348	0.50	-1.6
2,415,797	-	queA	Synpcc7942_2348	0.52	+0.3
2,415,798	-	queA	Synpcc7942_2348	0.52	-0.2
2,415,812	+	queA	Synpcc7942_2348	0.54	+2.2
2,415,815	-	queA	Synpcc7942_2348	0.54	+1.5
2,415,825	+	queA	Synpcc7942_2348	0.55	+1.5
2,415,828	-	queA	Synpcc7942_2348	0.55	+1.3
2,415,842	+	queA	Synpcc7942_2348	0.56	+0.7
2,415,843	+	queA	Synpcc7942_2348	0.56	+0.7
2,415,849	-	queA	Synpcc7942_2348	0.57	+0.5
2,415,861	-	queA	Synpcc7942_2348	0.58	+1.8
2,415,869	+	queA	Synpcc7942_2348	0.59	+2.3
2,415,870	-	queA	Synpcc7942_2348	0.59	-0.4
2,415,881	-	queA	Synpcc7942_2348	0.60	+1.9
2,415,891	+	queA	Synpcc7942_2348	0.61	+1.4
2,415,894	-	queA	Synpcc7942_2348	0.61	+2.2
2,415,900	-	queA	Synpcc7942_2348	0.62	+1.5
2,415,909	-	queA	Synpcc7942_2348	0.63	+0.2
2,415,923	-	queA	Synpcc7942_2348	0.64	+1.7
2,415,923	-	queA	Synpcc7942_2348	0.64	+2.0
2,415,924	+	queA	Synpcc7942_2348	0.64	+1.8
2,415,927	+	queA	Synpcc7942_2348	0.64	+0.5
2,415,934	+	queA	Synpcc7942_2348	0.65	+1.3
2,416,027	+	queA	Synpcc7942_2348	0.74	+1.0
2,416,036	-	queA	Synpcc7942_2348	0.74	+1.2
2,416,056	-	queA	Synpcc7942_2348	0.76	+1.9
2,416,064	+	queA	Synpcc7942_2348	0.77	+1.2
2,416,064	+	queA	Synpcc7942_2348	0.77	+1.9
2,416,072	-	queA	Synpcc7942_2348	0.78	+1.6
2,416,075	+	queA	Synpcc7942_2348	0.78	+1.0
2,416,075	+	queA	Synpcc7942_2348	0.78	+1.2
2,416,075	+	queA	Synpcc7942_2348	0.78	+1.3
2,416,118	+	queA	Synpcc7942_2348	0.82	+1.3
2,416,122	+	queA	Synpcc7942_2348	0.82	+1.1
2,416,122	+	queA	Synpcc7942_2348	0.82	+1.4
2,416,192	-	queA	Synpcc7942_2348	0.89	+0.9
2,416,206	+				+1.5