Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2334

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,400,343	+	opcA	Synpcc7942_2333	0.28	-1.2
2,400,388	+	opcA	Synpcc7942_2333	0.32	-2.9
2,400,396	-	opcA	Synpcc7942_2333	0.32	-2.0
2,400,448	-	opcA	Synpcc7942_2333	0.36	-3.4
2,400,458	-	opcA	Synpcc7942_2333	0.37	-2.1
2,400,500	-	opcA	Synpcc7942_2333	0.40	-2.6
2,400,576	-	opcA	Synpcc7942_2333	0.46	-2.4
2,400,586	-	opcA	Synpcc7942_2333	0.47	-0.4
2,400,691	+	opcA	Synpcc7942_2333	0.54	-0.9
2,400,699	-	opcA	Synpcc7942_2333	0.55	-1.3
2,400,713	-	opcA	Synpcc7942_2333	0.56	-1.8
2,400,714	-	opcA	Synpcc7942_2333	0.56	-2.3
2,400,763	+	opcA	Synpcc7942_2333	0.60	-1.1
2,400,789	-	opcA	Synpcc7942_2333	0.62	-0.8
2,400,789	-	opcA	Synpcc7942_2333	0.62	-1.0
2,400,797	-	opcA	Synpcc7942_2333	0.62	-2.4
2,400,808	+	opcA	Synpcc7942_2333	0.63	-2.2
2,400,810	+	opcA	Synpcc7942_2333	0.63	-2.0
2,400,851	+	opcA	Synpcc7942_2333	0.66	-2.4
2,400,853	+	opcA	Synpcc7942_2333	0.67	-1.1
2,400,858	+	opcA	Synpcc7942_2333	0.67	-1.9
2,400,866	-	opcA	Synpcc7942_2333	0.68	-1.0
2,400,908	+	opcA	Synpcc7942_2333	0.71	-1.8
2,400,908	+	opcA	Synpcc7942_2333	0.71	-1.8
2,400,908	-	opcA	Synpcc7942_2333	0.71	-0.2
2,400,915	+	opcA	Synpcc7942_2333	0.71	-2.7
2,400,915	+	opcA	Synpcc7942_2333	0.71	-2.0
2,400,923	-	opcA	Synpcc7942_2333	0.72	+1.0
2,400,933	-	opcA	Synpcc7942_2333	0.73	-3.8
2,400,938	-	opcA	Synpcc7942_2333	0.73	-1.1
2,400,938	-	opcA	Synpcc7942_2333	0.73	-3.1
2,400,948	-	opcA	Synpcc7942_2333	0.74	-2.1
2,400,958	+	opcA	Synpcc7942_2333	0.74	-1.9
2,400,963	-	opcA	Synpcc7942_2333	0.75	-0.3
2,400,966	-	opcA	Synpcc7942_2333	0.75	-1.1
2,400,966	-	opcA	Synpcc7942_2333	0.75	-3.6
2,400,976	-	opcA	Synpcc7942_2333	0.76	-2.5
2,400,986	-	opcA	Synpcc7942_2333	0.77	-1.0
2,400,995	-	opcA	Synpcc7942_2333	0.77	-3.2
2,401,016	+	opcA	Synpcc7942_2333	0.79	-0.7
2,401,016	+	opcA	Synpcc7942_2333	0.79	-1.6
2,401,016	+	opcA	Synpcc7942_2333	0.79	-2.1
2,401,022	-	opcA	Synpcc7942_2333	0.79	-1.0
2,401,024	-	opcA	Synpcc7942_2333	0.79	+1.9
2,401,024	-	opcA	Synpcc7942_2333	0.79	-2.6
2,401,090	-	opcA	Synpcc7942_2333	0.84	-2.5
2,401,102	-	opcA	Synpcc7942_2333	0.85	-2.4
2,401,107	-	opcA	Synpcc7942_2333	0.86	-1.8
2,401,113	-	opcA	Synpcc7942_2333	0.86	-1.6
2,401,139	+	opcA	Synpcc7942_2333	0.88	-1.1
2,401,145	-	opcA	Synpcc7942_2333	0.88	-2.3
2,401,168	+				-3.1
2,401,180	-				-0.7
2,401,190	+				-1.8
2,401,201	-				-1.9
2,401,211	+				-0.5
2,401,211	+				-1.1
2,401,211	+				+1.0
2,401,211	+				+0.0
2,401,214	-				-2.4
2,401,219	-				-0.9
2,401,219	-				-0.1
2,401,219	-				-2.8
2,401,381	-				-2.6
2,401,492	+				-2.9
2,401,500	-	zwf	Synpcc7942_2334	0.10	-3.6
2,401,507	+	zwf	Synpcc7942_2334	0.11	-2.0
2,401,507	+	zwf	Synpcc7942_2334	0.11	-4.8
2,401,507	+	zwf	Synpcc7942_2334	0.11	-2.7
2,401,515	-	zwf	Synpcc7942_2334	0.11	-1.8
2,401,515	-	zwf	Synpcc7942_2334	0.11	-1.5
2,401,515	-	zwf	Synpcc7942_2334	0.11	-3.2
2,401,537	+	zwf	Synpcc7942_2334	0.13	-2.4
2,401,540	-	zwf	Synpcc7942_2334	0.13	-2.3
2,401,545	-	zwf	Synpcc7942_2334	0.13	-0.4
2,401,552	+	zwf	Synpcc7942_2334	0.14	-3.2
2,401,553	+	zwf	Synpcc7942_2334	0.14	-3.5
2,401,568	-	zwf	Synpcc7942_2334	0.15	-3.3
2,401,584	-	zwf	Synpcc7942_2334	0.16	-3.8
2,401,602	-	zwf	Synpcc7942_2334	0.17	-1.0
2,401,607	-	zwf	Synpcc7942_2334	0.17	-3.2
2,401,609	-	zwf	Synpcc7942_2334	0.18	-1.3
2,401,631	-	zwf	Synpcc7942_2334	0.19	-3.3
2,401,654	+	zwf	Synpcc7942_2334	0.21	-2.6
2,401,665	+	zwf	Synpcc7942_2334	0.21	-2.4
2,401,667	+	zwf	Synpcc7942_2334	0.21	-3.5
2,401,667	+	zwf	Synpcc7942_2334	0.21	-2.3
2,401,673	-	zwf	Synpcc7942_2334	0.22	-2.7
2,401,691	+	zwf	Synpcc7942_2334	0.23	-4.8
2,401,697	-	zwf	Synpcc7942_2334	0.23	-2.9
2,401,697	-	zwf	Synpcc7942_2334	0.23	-2.6
2,401,698	+	zwf	Synpcc7942_2334	0.23	-4.5
2,401,698	-	zwf	Synpcc7942_2334	0.23	-4.0
2,401,706	-	zwf	Synpcc7942_2334	0.24	-1.6
2,401,751	+	zwf	Synpcc7942_2334	0.27	-1.8
2,401,761	+	zwf	Synpcc7942_2334	0.27	-2.5
2,401,779	-	zwf	Synpcc7942_2334	0.29	-2.4
2,401,792	+	zwf	Synpcc7942_2334	0.29	-3.0
2,401,793	+	zwf	Synpcc7942_2334	0.30	-1.8
2,401,800	-	zwf	Synpcc7942_2334	0.30	-2.7
2,401,803	+	zwf	Synpcc7942_2334	0.30	-4.9
2,401,803	+	zwf	Synpcc7942_2334	0.30	-3.4
2,401,829	-	zwf	Synpcc7942_2334	0.32	-2.2
2,401,829	-	zwf	Synpcc7942_2334	0.32	-1.6
2,401,837	+	zwf	Synpcc7942_2334	0.32	-2.9
2,401,861	+	zwf	Synpcc7942_2334	0.34	-2.3
2,401,872	+	zwf	Synpcc7942_2334	0.35	-3.5
2,401,879	+	zwf	Synpcc7942_2334	0.35	-1.3
2,401,879	-	zwf	Synpcc7942_2334	0.35	-4.2
2,401,890	-	zwf	Synpcc7942_2334	0.36	-3.4
2,401,905	-	zwf	Synpcc7942_2334	0.37	-4.1
2,401,920	-	zwf	Synpcc7942_2334	0.38	-2.8
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.6
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.7
2,401,943	+	zwf	Synpcc7942_2334	0.39	-2.2
2,401,943	+	zwf	Synpcc7942_2334	0.39	-3.2
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.5
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.4
2,401,943	+	zwf	Synpcc7942_2334	0.39	-2.3
2,401,943	+	zwf	Synpcc7942_2334	0.39	-2.4
2,401,951	-	zwf	Synpcc7942_2334	0.40	-3.5
2,401,951	-	zwf	Synpcc7942_2334	0.40	-2.3
2,401,951	-	zwf	Synpcc7942_2334	0.40	+0.4
2,401,956	-	zwf	Synpcc7942_2334	0.40	-1.0
2,402,010	-	zwf	Synpcc7942_2334	0.44	-1.8
2,402,012	+	zwf	Synpcc7942_2334	0.44	-2.2
2,402,012	+	zwf	Synpcc7942_2334	0.44	-3.4
2,402,020	-	zwf	Synpcc7942_2334	0.44	-2.8
2,402,020	-	zwf	Synpcc7942_2334	0.44	-2.4
2,402,020	-	zwf	Synpcc7942_2334	0.44	-2.1
2,402,051	+	zwf	Synpcc7942_2334	0.46	-3.0
2,402,051	-	zwf	Synpcc7942_2334	0.46	-3.2
2,402,053	-	zwf	Synpcc7942_2334	0.46	-2.0
2,402,053	-	zwf	Synpcc7942_2334	0.46	-2.4
2,402,083	+	zwf	Synpcc7942_2334	0.48	-3.2
2,402,086	-	zwf	Synpcc7942_2334	0.49	-3.9
2,402,098	+	zwf	Synpcc7942_2334	0.49	-1.6
2,402,103	+	zwf	Synpcc7942_2334	0.50	-3.6
2,402,106	+	zwf	Synpcc7942_2334	0.50	-5.4
2,402,107	-	zwf	Synpcc7942_2334	0.50	-3.1
2,402,110	+	zwf	Synpcc7942_2334	0.50	-2.2
2,402,142	-	zwf	Synpcc7942_2334	0.52	-1.2
2,402,173	-	zwf	Synpcc7942_2334	0.54	-2.9
2,402,173	-	zwf	Synpcc7942_2334	0.54	-2.1
2,402,179	+	zwf	Synpcc7942_2334	0.55	-3.6
2,402,182	-	zwf	Synpcc7942_2334	0.55	-4.8
2,402,187	-	zwf	Synpcc7942_2334	0.55	-2.2
2,402,198	-	zwf	Synpcc7942_2334	0.56	-3.1
2,402,203	-	zwf	Synpcc7942_2334	0.56	-1.6
2,402,217	+	zwf	Synpcc7942_2334	0.57	-2.9
2,402,278	+	zwf	Synpcc7942_2334	0.61	-2.7
2,402,284	-	zwf	Synpcc7942_2334	0.62	-1.3
2,402,284	-	zwf	Synpcc7942_2334	0.62	-3.2
2,402,285	-	zwf	Synpcc7942_2334	0.62	-0.6
2,402,299	-	zwf	Synpcc7942_2334	0.62	-3.5
2,402,338	-	zwf	Synpcc7942_2334	0.65	-2.7
2,402,345	+	zwf	Synpcc7942_2334	0.65	-3.5
2,402,409	+	zwf	Synpcc7942_2334	0.70	-3.9
2,402,410	+	zwf	Synpcc7942_2334	0.70	-1.4
2,402,418	-	zwf	Synpcc7942_2334	0.70	-2.6
2,402,428	-	zwf	Synpcc7942_2334	0.71	-4.3
2,402,428	-	zwf	Synpcc7942_2334	0.71	-3.0
2,402,438	-	zwf	Synpcc7942_2334	0.72	+0.4
2,402,447	+	zwf	Synpcc7942_2334	0.72	-5.1
2,402,449	+	zwf	Synpcc7942_2334	0.72	-2.7
2,402,462	+	zwf	Synpcc7942_2334	0.73	-1.6
2,402,488	-	zwf	Synpcc7942_2334	0.75	-4.3
2,402,546	-	zwf	Synpcc7942_2334	0.79	-1.6
2,402,552	-	zwf	Synpcc7942_2334	0.79	-3.5
2,402,553	+	zwf	Synpcc7942_2334	0.79	-4.0
2,402,553	+	zwf	Synpcc7942_2334	0.79	-3.7
2,402,561	-	zwf	Synpcc7942_2334	0.80	-1.3
2,402,561	-	zwf	Synpcc7942_2334	0.80	-2.7
2,402,583	-	zwf	Synpcc7942_2334	0.81	-2.1
2,402,586	+	zwf	Synpcc7942_2334	0.81	-3.6
2,402,586	+	zwf	Synpcc7942_2334	0.81	-2.9
2,402,586	+	zwf	Synpcc7942_2334	0.81	-4.7
2,402,586	+	zwf	Synpcc7942_2334	0.81	-2.3
2,402,594	-	zwf	Synpcc7942_2334	0.82	-3.7
2,402,602	+	zwf	Synpcc7942_2334	0.82	-4.0
2,402,634	+	zwf	Synpcc7942_2334	0.84	-2.8
2,402,642	-	zwf	Synpcc7942_2334	0.85	-5.0
2,402,650	-	zwf	Synpcc7942_2334	0.85	-2.0
2,402,759	+				-4.0
2,402,769	+				-2.4
2,402,769	+				-0.6
2,402,769	+				-2.3
2,402,776	-				-1.6
2,402,777	-				-2.0
2,402,777	-				-3.4
2,402,804	+				-2.7
2,402,835	+				-2.9
2,402,835	+				-2.0
2,402,843	-				-2.6
2,402,862	+				-2.2
2,402,862	+				-2.7
2,402,870	-				-1.0
2,402,870	-				-3.5
2,402,870	-				-1.0
2,402,870	-				-2.9
2,402,870	-				-1.8
2,402,870	-				-0.6
2,402,872	+				+1.2
2,402,872	+				-0.2
2,402,903	+				-0.5
2,402,911	-				-1.2
2,402,919	+				+0.4
2,402,919	+				-1.7
2,402,919	+				+0.7
2,402,919	+				+0.7
2,402,919	+				+0.0
2,402,927	-				-0.8
2,402,927	-				+0.1
2,402,927	-				+1.2
2,402,933	-				-0.6
2,402,945	-				+0.5
2,402,957	+				-2.1
2,402,957	+				-1.6
2,402,965	-				-2.2
2,403,005	+				-0.4
2,403,013	-				-1.2
2,403,013	-				+0.2
2,403,026	+	fbp	Synpcc7942_2335	0.10	-3.1
2,403,042	+	fbp	Synpcc7942_2335	0.12	-1.5
2,403,050	-	fbp	Synpcc7942_2335	0.12	+0.2
2,403,063	+	fbp	Synpcc7942_2335	0.14	-1.8
2,403,093	+	fbp	Synpcc7942_2335	0.17	-1.3
2,403,093	+	fbp	Synpcc7942_2335	0.17	-1.0
2,403,093	+	fbp	Synpcc7942_2335	0.17	-1.1
2,403,101	-	fbp	Synpcc7942_2335	0.17	-0.4
2,403,107	+	fbp	Synpcc7942_2335	0.18	+0.0
2,403,111	-	fbp	Synpcc7942_2335	0.18	-3.0
2,403,132	+	fbp	Synpcc7942_2335	0.20	+0.5
2,403,143	+	fbp	Synpcc7942_2335	0.21	+1.0
2,403,158	-	fbp	Synpcc7942_2335	0.23	-1.0
2,403,209	+	fbp	Synpcc7942_2335	0.28	-0.7
2,403,217	-	fbp	Synpcc7942_2335	0.29	-1.8
2,403,264	-	fbp	Synpcc7942_2335	0.33	-0.4
2,403,291	+	fbp	Synpcc7942_2335	0.36	-0.5
2,403,291	+	fbp	Synpcc7942_2335	0.36	-0.6
2,403,291	+	fbp	Synpcc7942_2335	0.36	-1.6
2,403,291	+	fbp	Synpcc7942_2335	0.36	-2.2
2,403,299	-	fbp	Synpcc7942_2335	0.37	-0.4
2,403,304	-	fbp	Synpcc7942_2335	0.37	-2.3
2,403,306	+	fbp	Synpcc7942_2335	0.37	-3.4
2,403,314	-	fbp	Synpcc7942_2335	0.38	-0.9
2,403,321	+	fbp	Synpcc7942_2335	0.39	-0.6
2,403,321	+	fbp	Synpcc7942_2335	0.39	-2.5
2,403,321	+	fbp	Synpcc7942_2335	0.39	-2.2
2,403,321	+	fbp	Synpcc7942_2335	0.39	-0.9
2,403,336	+	fbp	Synpcc7942_2335	0.40	-1.1
2,403,338	+	fbp	Synpcc7942_2335	0.40	-1.7
2,403,346	+	fbp	Synpcc7942_2335	0.41	-2.0
2,403,354	-				-1.0
2,403,385	+	fbp	Synpcc7942_2335	0.45	-0.6
2,403,385	+	fbp	Synpcc7942_2335	0.45	-1.5
2,403,401	-	fbp	Synpcc7942_2335	0.46	-0.4
2,403,403	+	fbp	Synpcc7942_2335	0.47	-2.2
2,403,408	+				-1.6
2,403,416	-	fbp	Synpcc7942_2335	0.48	-1.0
2,403,416	-	fbp	Synpcc7942_2335	0.48	-1.6
2,403,474	+	fbp	Synpcc7942_2335	0.53	-0.1
2,403,489	+	fbp	Synpcc7942_2335	0.55	+0.0
2,403,489	+	fbp	Synpcc7942_2335	0.55	-1.5
2,403,507	-	fbp	Synpcc7942_2335	0.57	-1.6
2,403,567	+	fbp	Synpcc7942_2335	0.62	-1.3
2,403,570	+	fbp	Synpcc7942_2335	0.63	-0.1
2,403,570	+	fbp	Synpcc7942_2335	0.63	-1.1
2,403,575	+				-1.3
2,403,578	-	fbp	Synpcc7942_2335	0.63	-0.9
2,403,578	-	fbp	Synpcc7942_2335	0.63	-1.7
2,403,583	-	fbp	Synpcc7942_2335	0.64	-1.4
2,403,588	-	fbp	Synpcc7942_2335	0.64	-3.6
2,403,614	+	fbp	Synpcc7942_2335	0.67	-2.5
2,403,615	+	fbp	Synpcc7942_2335	0.67	-1.9
2,403,623	-	fbp	Synpcc7942_2335	0.68	-0.3
2,403,676	-	fbp	Synpcc7942_2335	0.73	-0.9
2,403,696	+	fbp	Synpcc7942_2335	0.75	-1.2
2,403,725	+	fbp	Synpcc7942_2335	0.78	-0.6
2,403,725	+	fbp	Synpcc7942_2335	0.78	-1.7
2,403,733	-	fbp	Synpcc7942_2335	0.78	-1.6
2,403,745	-	fbp	Synpcc7942_2335	0.80	-2.7
2,403,803	-	fbp	Synpcc7942_2335	0.85	-1.8
2,403,814	+	fbp	Synpcc7942_2335	0.86	-1.7
2,403,822	-	fbp	Synpcc7942_2335	0.87	-1.3
2,403,822	-	fbp	Synpcc7942_2335	0.87	-2.0
2,403,835	-	fbp	Synpcc7942_2335	0.88	-1.5
2,403,842	+	fbp	Synpcc7942_2335	0.89	-1.4
2,403,842	+	fbp	Synpcc7942_2335	0.89	-3.2
2,403,842	+	fbp	Synpcc7942_2335	0.89	-0.3
2,403,842	+	fbp	Synpcc7942_2335	0.89	-2.7
2,403,842	+	fbp	Synpcc7942_2335	0.89	-0.3
2,403,850	-	fbp	Synpcc7942_2335	0.90	-2.3
2,403,850	-	fbp	Synpcc7942_2335	0.90	-3.4
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.6
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.6
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.3
2,403,850	-	fbp	Synpcc7942_2335	0.90	+0.2
2,403,850	-	fbp	Synpcc7942_2335	0.90	-2.9
2,403,850	-				-1.3
2,403,856	+				-0.2
2,403,863	+				-0.9