Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2333

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,399,845	+				-0.5
2,399,845	+				+0.5
2,399,869	-				-0.1
2,399,880	+				-2.2
2,399,940	-				+0.7
2,399,960	+				-0.4
2,399,977	+				-1.1
2,399,985	+				-1.1
2,399,993	-				+0.3
2,400,030	+				-2.2
2,400,040	-				-1.8
2,400,082	+				-0.2
2,400,094	-				-0.2
2,400,099	-	opcA	Synpcc7942_2333	0.10	-1.7
2,400,104	-	opcA	Synpcc7942_2333	0.11	-1.5
2,400,127	-	opcA	Synpcc7942_2333	0.12	-2.1
2,400,210	+	opcA	Synpcc7942_2333	0.19	-0.3
2,400,223	+	opcA	Synpcc7942_2333	0.20	-2.4
2,400,223	+	opcA	Synpcc7942_2333	0.20	-1.9
2,400,231	-				-2.6
2,400,231	-	opcA	Synpcc7942_2333	0.20	-1.4
2,400,269	+	opcA	Synpcc7942_2333	0.23	-1.4
2,400,277	-	opcA	Synpcc7942_2333	0.24	-1.7
2,400,296	-	opcA	Synpcc7942_2333	0.25	-3.1
2,400,316	+	opcA	Synpcc7942_2333	0.26	-1.2
2,400,343	+	opcA	Synpcc7942_2333	0.28	-1.2
2,400,388	+	opcA	Synpcc7942_2333	0.32	-2.9
2,400,396	-	opcA	Synpcc7942_2333	0.32	-2.0
2,400,448	-	opcA	Synpcc7942_2333	0.36	-3.4
2,400,458	-	opcA	Synpcc7942_2333	0.37	-2.1
2,400,500	-	opcA	Synpcc7942_2333	0.40	-2.6
2,400,576	-	opcA	Synpcc7942_2333	0.46	-2.4
2,400,586	-	opcA	Synpcc7942_2333	0.47	-0.4
2,400,691	+	opcA	Synpcc7942_2333	0.54	-0.9
2,400,699	-	opcA	Synpcc7942_2333	0.55	-1.3
2,400,713	-	opcA	Synpcc7942_2333	0.56	-1.8
2,400,714	-	opcA	Synpcc7942_2333	0.56	-2.3
2,400,763	+	opcA	Synpcc7942_2333	0.60	-1.1
2,400,789	-	opcA	Synpcc7942_2333	0.62	-0.8
2,400,789	-	opcA	Synpcc7942_2333	0.62	-1.0
2,400,797	-	opcA	Synpcc7942_2333	0.62	-2.4
2,400,808	+	opcA	Synpcc7942_2333	0.63	-2.2
2,400,810	+	opcA	Synpcc7942_2333	0.63	-2.0
2,400,851	+	opcA	Synpcc7942_2333	0.66	-2.4
2,400,853	+	opcA	Synpcc7942_2333	0.67	-1.1
2,400,858	+	opcA	Synpcc7942_2333	0.67	-1.9
2,400,866	-	opcA	Synpcc7942_2333	0.68	-1.0
2,400,908	+	opcA	Synpcc7942_2333	0.71	-1.8
2,400,908	+	opcA	Synpcc7942_2333	0.71	-1.8
2,400,908	-	opcA	Synpcc7942_2333	0.71	-0.2
2,400,915	+	opcA	Synpcc7942_2333	0.71	-2.7
2,400,915	+	opcA	Synpcc7942_2333	0.71	-2.0
2,400,923	-	opcA	Synpcc7942_2333	0.72	+1.0
2,400,933	-	opcA	Synpcc7942_2333	0.73	-3.8
2,400,938	-	opcA	Synpcc7942_2333	0.73	-1.1
2,400,938	-	opcA	Synpcc7942_2333	0.73	-3.1
2,400,948	-	opcA	Synpcc7942_2333	0.74	-2.1
2,400,958	+	opcA	Synpcc7942_2333	0.74	-1.9
2,400,963	-	opcA	Synpcc7942_2333	0.75	-0.3
2,400,966	-	opcA	Synpcc7942_2333	0.75	-1.1
2,400,966	-	opcA	Synpcc7942_2333	0.75	-3.6
2,400,976	-	opcA	Synpcc7942_2333	0.76	-2.5
2,400,986	-	opcA	Synpcc7942_2333	0.77	-1.0
2,400,995	-	opcA	Synpcc7942_2333	0.77	-3.2
2,401,016	+	opcA	Synpcc7942_2333	0.79	-0.7
2,401,016	+	opcA	Synpcc7942_2333	0.79	-1.6
2,401,016	+	opcA	Synpcc7942_2333	0.79	-2.1
2,401,022	-	opcA	Synpcc7942_2333	0.79	-1.0
2,401,024	-	opcA	Synpcc7942_2333	0.79	+1.9
2,401,024	-	opcA	Synpcc7942_2333	0.79	-2.6
2,401,090	-	opcA	Synpcc7942_2333	0.84	-2.5
2,401,102	-	opcA	Synpcc7942_2333	0.85	-2.4
2,401,107	-	opcA	Synpcc7942_2333	0.86	-1.8
2,401,113	-	opcA	Synpcc7942_2333	0.86	-1.6
2,401,139	+	opcA	Synpcc7942_2333	0.88	-1.1
2,401,145	-	opcA	Synpcc7942_2333	0.88	-2.3
2,401,168	+				-3.1
2,401,180	-				-0.7
2,401,190	+				-1.8
2,401,201	-				-1.9
2,401,211	+				-0.5
2,401,211	+				-1.1
2,401,211	+				+1.0
2,401,211	+				+0.0
2,401,214	-				-2.4
2,401,219	-				-0.9
2,401,219	-				-0.1
2,401,219	-				-2.8
2,401,381	-				-2.6
2,401,492	+				-2.9
2,401,500	-	zwf	Synpcc7942_2334	0.10	-3.6
2,401,507	+	zwf	Synpcc7942_2334	0.11	-2.0
2,401,507	+	zwf	Synpcc7942_2334	0.11	-4.8
2,401,507	+	zwf	Synpcc7942_2334	0.11	-2.7
2,401,515	-	zwf	Synpcc7942_2334	0.11	-1.8
2,401,515	-	zwf	Synpcc7942_2334	0.11	-1.5
2,401,515	-	zwf	Synpcc7942_2334	0.11	-3.2
2,401,537	+	zwf	Synpcc7942_2334	0.13	-2.4
2,401,540	-	zwf	Synpcc7942_2334	0.13	-2.3
2,401,545	-	zwf	Synpcc7942_2334	0.13	-0.4
2,401,552	+	zwf	Synpcc7942_2334	0.14	-3.2
2,401,553	+	zwf	Synpcc7942_2334	0.14	-3.5
2,401,568	-	zwf	Synpcc7942_2334	0.15	-3.3
2,401,584	-	zwf	Synpcc7942_2334	0.16	-3.8
2,401,602	-	zwf	Synpcc7942_2334	0.17	-1.0
2,401,607	-	zwf	Synpcc7942_2334	0.17	-3.2
2,401,609	-	zwf	Synpcc7942_2334	0.18	-1.3
2,401,631	-	zwf	Synpcc7942_2334	0.19	-3.3
2,401,654	+	zwf	Synpcc7942_2334	0.21	-2.6
2,401,665	+	zwf	Synpcc7942_2334	0.21	-2.4
2,401,667	+	zwf	Synpcc7942_2334	0.21	-3.5
2,401,667	+	zwf	Synpcc7942_2334	0.21	-2.3
2,401,673	-	zwf	Synpcc7942_2334	0.22	-2.7
2,401,691	+	zwf	Synpcc7942_2334	0.23	-4.8
2,401,697	-	zwf	Synpcc7942_2334	0.23	-2.9
2,401,697	-	zwf	Synpcc7942_2334	0.23	-2.6
2,401,698	+	zwf	Synpcc7942_2334	0.23	-4.5
2,401,698	-	zwf	Synpcc7942_2334	0.23	-4.0
2,401,706	-	zwf	Synpcc7942_2334	0.24	-1.6
2,401,751	+	zwf	Synpcc7942_2334	0.27	-1.8
2,401,761	+	zwf	Synpcc7942_2334	0.27	-2.5
2,401,779	-	zwf	Synpcc7942_2334	0.29	-2.4
2,401,792	+	zwf	Synpcc7942_2334	0.29	-3.0
2,401,793	+	zwf	Synpcc7942_2334	0.30	-1.8
2,401,800	-	zwf	Synpcc7942_2334	0.30	-2.7
2,401,803	+	zwf	Synpcc7942_2334	0.30	-4.9
2,401,803	+	zwf	Synpcc7942_2334	0.30	-3.4
2,401,829	-	zwf	Synpcc7942_2334	0.32	-2.2
2,401,829	-	zwf	Synpcc7942_2334	0.32	-1.6
2,401,837	+	zwf	Synpcc7942_2334	0.32	-2.9
2,401,861	+	zwf	Synpcc7942_2334	0.34	-2.3
2,401,872	+	zwf	Synpcc7942_2334	0.35	-3.5
2,401,879	+	zwf	Synpcc7942_2334	0.35	-1.3
2,401,879	-	zwf	Synpcc7942_2334	0.35	-4.2
2,401,890	-	zwf	Synpcc7942_2334	0.36	-3.4
2,401,905	-	zwf	Synpcc7942_2334	0.37	-4.1
2,401,920	-	zwf	Synpcc7942_2334	0.38	-2.8
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.6
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.7
2,401,943	+	zwf	Synpcc7942_2334	0.39	-2.2
2,401,943	+	zwf	Synpcc7942_2334	0.39	-3.2
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.5
2,401,943	+	zwf	Synpcc7942_2334	0.39	-1.4
2,401,943	+	zwf	Synpcc7942_2334	0.39	-2.3
2,401,943	+	zwf	Synpcc7942_2334	0.39	-2.4
2,401,951	-	zwf	Synpcc7942_2334	0.40	-3.5
2,401,951	-	zwf	Synpcc7942_2334	0.40	-2.3
2,401,951	-	zwf	Synpcc7942_2334	0.40	+0.4
2,401,956	-	zwf	Synpcc7942_2334	0.40	-1.0
2,402,010	-	zwf	Synpcc7942_2334	0.44	-1.8
2,402,012	+	zwf	Synpcc7942_2334	0.44	-2.2
2,402,012	+	zwf	Synpcc7942_2334	0.44	-3.4
2,402,020	-	zwf	Synpcc7942_2334	0.44	-2.8
2,402,020	-	zwf	Synpcc7942_2334	0.44	-2.4
2,402,020	-	zwf	Synpcc7942_2334	0.44	-2.1
2,402,051	+	zwf	Synpcc7942_2334	0.46	-3.0
2,402,051	-	zwf	Synpcc7942_2334	0.46	-3.2
2,402,053	-	zwf	Synpcc7942_2334	0.46	-2.0
2,402,053	-	zwf	Synpcc7942_2334	0.46	-2.4
2,402,083	+	zwf	Synpcc7942_2334	0.48	-3.2
2,402,086	-	zwf	Synpcc7942_2334	0.49	-3.9
2,402,098	+	zwf	Synpcc7942_2334	0.49	-1.6
2,402,103	+	zwf	Synpcc7942_2334	0.50	-3.6
2,402,106	+	zwf	Synpcc7942_2334	0.50	-5.4
2,402,107	-	zwf	Synpcc7942_2334	0.50	-3.1
2,402,110	+	zwf	Synpcc7942_2334	0.50	-2.2
2,402,142	-	zwf	Synpcc7942_2334	0.52	-1.2
2,402,173	-	zwf	Synpcc7942_2334	0.54	-2.9
2,402,173	-	zwf	Synpcc7942_2334	0.54	-2.1
2,402,179	+	zwf	Synpcc7942_2334	0.55	-3.6
2,402,182	-	zwf	Synpcc7942_2334	0.55	-4.8
2,402,187	-	zwf	Synpcc7942_2334	0.55	-2.2
2,402,198	-	zwf	Synpcc7942_2334	0.56	-3.1
2,402,203	-	zwf	Synpcc7942_2334	0.56	-1.6
2,402,217	+	zwf	Synpcc7942_2334	0.57	-2.9
2,402,278	+	zwf	Synpcc7942_2334	0.61	-2.7
2,402,284	-	zwf	Synpcc7942_2334	0.62	-1.3
2,402,284	-	zwf	Synpcc7942_2334	0.62	-3.2
2,402,285	-	zwf	Synpcc7942_2334	0.62	-0.6
2,402,299	-	zwf	Synpcc7942_2334	0.62	-3.5