Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2277

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,343,715	+		Synpcc7942_2275	0.29	-0.7
2,343,718	-		Synpcc7942_2275	0.31	+1.2
2,343,780	-		Synpcc7942_2275	0.52	+0.2
2,343,791	+		Synpcc7942_2275	0.56	+0.1
2,343,866	+		Synpcc7942_2275	0.82	+0.4
2,343,909	+				-0.3
2,343,909	+				-0.9
2,343,917	-				-1.8
2,343,917	-				-0.4
2,343,932	-		Synpcc7942_2276	0.11	+1.0
2,343,952	-		Synpcc7942_2276	0.15	-0.8
2,343,959	-		Synpcc7942_2276	0.17	-0.3
2,343,970	+		Synpcc7942_2276	0.19	+0.8
2,343,970	+		Synpcc7942_2276	0.19	+0.4
2,343,995	+		Synpcc7942_2276	0.25	+2.0
2,344,003	-		Synpcc7942_2276	0.27	+0.3
2,344,005	+		Synpcc7942_2276	0.27	+0.4
2,344,005	+		Synpcc7942_2276	0.27	+0.7
2,344,013	-		Synpcc7942_2276	0.29	+0.6
2,344,028	-		Synpcc7942_2276	0.32	+1.2
2,344,029	-		Synpcc7942_2276	0.32	+2.1
2,344,040	+		Synpcc7942_2276	0.35	+0.5
2,344,053	+		Synpcc7942_2276	0.38	-0.4
2,344,082	-		Synpcc7942_2276	0.44	+0.4
2,344,132	+		Synpcc7942_2276	0.55	+1.8
2,344,140	-		Synpcc7942_2276	0.57	+0.1
2,344,140	-				+0.2
2,344,142	+		Synpcc7942_2276	0.57	+0.1
2,344,176	-		Synpcc7942_2276	0.65	-0.6
2,344,247	+		Synpcc7942_2276	0.81	+0.4
2,344,249	+		Synpcc7942_2276	0.81	+0.6
2,344,376	+				+1.0
2,344,403	-				-0.8
2,344,404	-				-0.0
2,344,426	+				+0.4
2,344,451	-				+0.4
2,344,485	-				-0.8
2,344,486	-				+0.2
2,344,499	+				+1.2
2,344,587	+				+0.6
2,344,604	+				+0.9
2,344,619	+				-0.8
2,344,638	+		Synpcc7942_2277	0.15	-0.9
2,344,698	-		Synpcc7942_2277	0.35	-2.5
2,344,746	-		Synpcc7942_2277	0.50	-0.9
2,344,763	+		Synpcc7942_2277	0.56	-1.3
2,344,777	+		Synpcc7942_2277	0.60	-0.3
2,344,784	-		Synpcc7942_2277	0.62	+1.0
2,344,790	-		Synpcc7942_2277	0.64	-2.1
2,344,849	-		Synpcc7942_2277	0.83	-0.5
2,344,858	+		Synpcc7942_2277	0.86	-1.1
2,344,858	+		Synpcc7942_2277	0.86	-2.7
2,344,858	+		Synpcc7942_2277	0.86	-2.6
2,344,866	-		Synpcc7942_2277	0.89	-1.0
2,344,888	-				-1.3
2,344,913	-				-1.2
2,344,918	-				-1.9
2,344,918	-				-0.9
2,344,953	+				-0.0
2,344,953	+				-1.0
2,344,953	+				-0.7
2,344,963	+				+0.5
2,344,963	+				-0.1
2,344,974	+				-0.5
2,344,974	+				+1.2
2,345,054	+				-1.1
2,345,056	+				-1.6
2,345,070	+				-1.3
2,345,078	-				+0.4
2,345,090	+				-2.1
2,345,092	-				+0.4
2,345,098	+				+0.0
2,345,131	-				+1.9
2,345,181	-				+0.5
2,345,181	-				-2.0
2,345,181	-				-1.4
2,345,215	-				+0.4
2,345,239	+				-0.7
2,345,239	+				+0.4
2,345,242	+				-1.3
2,345,242	+				-0.6
2,345,247	-				-0.4
2,345,250	-				-0.1
2,345,266	+				-1.6
2,345,272	+				-0.5
2,345,280	-				+2.2
2,345,431	-		Synpcc7942_2278	0.16	+0.6
2,345,453	+		Synpcc7942_2278	0.17	+0.2
2,345,480	+		Synpcc7942_2278	0.18	-0.4
2,345,482	+		Synpcc7942_2278	0.18	-0.7
2,345,490	-		Synpcc7942_2278	0.18	-1.1
2,345,490	-		Synpcc7942_2278	0.18	+0.0
2,345,524	+		Synpcc7942_2278	0.20	+1.0
2,345,565	+		Synpcc7942_2278	0.22	-1.0
2,345,565	+				-1.3
2,345,565	+		Synpcc7942_2278	0.22	-0.1
2,345,573	-		Synpcc7942_2278	0.22	-2.1
2,345,573	-		Synpcc7942_2278	0.22	+0.5
2,345,601	-		Synpcc7942_2278	0.24	-0.5
2,345,623	-		Synpcc7942_2278	0.25	+0.5