Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2267

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,334,862	-		Synpcc7942_2266	0.20	+0.2
2,334,934	-		Synpcc7942_2266	0.26	-0.1
2,334,965	-		Synpcc7942_2266	0.29	-0.6
2,335,009	+		Synpcc7942_2266	0.33	-0.1
2,335,023	+		Synpcc7942_2266	0.35	-0.2
2,335,026	-		Synpcc7942_2266	0.35	-0.7
2,335,028	+		Synpcc7942_2266	0.35	+0.2
2,335,031	-		Synpcc7942_2266	0.35	-1.2
2,335,031	-		Synpcc7942_2266	0.35	+0.7
2,335,038	+		Synpcc7942_2266	0.36	-0.4
2,335,069	+		Synpcc7942_2266	0.39	-0.3
2,335,069	-		Synpcc7942_2266	0.39	-2.3
2,335,075	+		Synpcc7942_2266	0.40	+0.5
2,335,075	+		Synpcc7942_2266	0.40	-0.1
2,335,075	+		Synpcc7942_2266	0.40	+0.1
2,335,083	-		Synpcc7942_2266	0.40	-0.6
2,335,083	-		Synpcc7942_2266	0.40	-0.3
2,335,083	-		Synpcc7942_2266	0.40	+0.1
2,335,097	-		Synpcc7942_2266	0.42	-1.2
2,335,108	+		Synpcc7942_2266	0.43	+0.1
2,335,143	+		Synpcc7942_2266	0.46	-0.2
2,335,150	+		Synpcc7942_2266	0.47	+1.5
2,335,157	-		Synpcc7942_2266	0.47	-1.8
2,335,163	-		Synpcc7942_2266	0.48	+0.5
2,335,223	+		Synpcc7942_2266	0.53	+0.5
2,335,223	+		Synpcc7942_2266	0.53	-0.4
2,335,233	+		Synpcc7942_2266	0.54	+1.0
2,335,243	+		Synpcc7942_2266	0.55	+0.3
2,335,248	+		Synpcc7942_2266	0.56	+0.6
2,335,248	+		Synpcc7942_2266	0.56	-0.2
2,335,248	+		Synpcc7942_2266	0.56	+0.1
2,335,248	+		Synpcc7942_2266	0.56	-0.1
2,335,256	-		Synpcc7942_2266	0.57	-1.1
2,335,256	-		Synpcc7942_2266	0.57	-0.4
2,335,263	+		Synpcc7942_2266	0.57	-0.7
2,335,271	-		Synpcc7942_2266	0.58	-0.8
2,335,305	-		Synpcc7942_2266	0.61	-0.8
2,335,308	+		Synpcc7942_2266	0.61	-0.0
2,335,318	+		Synpcc7942_2266	0.62	-0.1
2,335,318	+		Synpcc7942_2266	0.62	-1.3
2,335,336	-		Synpcc7942_2266	0.64	+0.5
2,335,346	+		Synpcc7942_2266	0.65	-0.4
2,335,396	+		Synpcc7942_2266	0.70	-0.5
2,335,404	-		Synpcc7942_2266	0.70	+0.4
2,335,417	+		Synpcc7942_2266	0.72	-0.2
2,335,417	+		Synpcc7942_2266	0.72	+1.0
2,335,417	+		Synpcc7942_2266	0.72	-0.3
2,335,418	+		Synpcc7942_2266	0.72	-0.6
2,335,418	+		Synpcc7942_2266	0.72	-1.5
2,335,418	+		Synpcc7942_2266	0.72	-1.3
2,335,420	-		Synpcc7942_2266	0.72	+1.2
2,335,425	-		Synpcc7942_2266	0.72	-0.6
2,335,425	-		Synpcc7942_2266	0.72	+0.4
2,335,436	+		Synpcc7942_2266	0.73	+0.6
2,335,453	+		Synpcc7942_2266	0.75	-0.9
2,335,461	-		Synpcc7942_2266	0.76	-0.4
2,335,476	+		Synpcc7942_2266	0.77	-1.0
2,335,491	-		Synpcc7942_2266	0.79	-0.8
2,335,510	+		Synpcc7942_2266	0.80	+0.5
2,335,522	-		Synpcc7942_2266	0.82	+0.3
2,335,549	+		Synpcc7942_2266	0.84	+0.5
2,335,561	+		Synpcc7942_2266	0.85	-0.2
2,335,561	+		Synpcc7942_2266	0.85	-1.1
2,335,569	-		Synpcc7942_2266	0.86	-1.6
2,335,569	-		Synpcc7942_2266	0.86	-2.6
2,335,569	-		Synpcc7942_2266	0.86	+0.4
2,335,580	+		Synpcc7942_2266	0.87	-0.2
2,335,588	-		Synpcc7942_2266	0.88	-0.0
2,335,603	-		Synpcc7942_2266	0.89	-0.1
2,335,603	-		Synpcc7942_2266	0.89	-2.6
2,335,610	-		Synpcc7942_2266	0.90	-1.3
2,335,610	-		Synpcc7942_2266	0.90	-0.3
2,335,612	+				+0.3
2,335,612	+				-0.3
2,335,612	+				+0.2
2,335,612	+				-1.0
2,335,612	+				+0.7
2,335,612	+				-1.8
2,335,612	+				+0.4
2,335,620	-				-0.2
2,335,631	+				-1.1
2,335,666	+				+0.7
2,335,669	-				-0.6
2,335,669	-				+0.2
2,335,669	-				-1.9
2,335,670	-				-0.3
2,335,684	-				+0.4
2,335,689	-				-0.1
2,335,737	+				-1.0
2,335,737	+				-0.1
2,335,747	+				-0.5
2,335,768	+				+0.8
2,335,769	-				+1.0
2,335,776	-				-1.1
2,335,817	-				-2.1
2,335,875	-		Synpcc7942_2267	0.11	-1.9
2,335,885	-		Synpcc7942_2267	0.15	+1.4
2,335,905	+		Synpcc7942_2267	0.23	-1.6
2,335,939	-		Synpcc7942_2267	0.36	+0.3
2,335,975	+		Synpcc7942_2267	0.50	-1.6
2,336,028	-		Synpcc7942_2267	0.71	-2.0
2,336,030	+		Synpcc7942_2267	0.71	-1.9
2,336,033	-		Synpcc7942_2267	0.72	-0.4
2,336,043	-		Synpcc7942_2267	0.76	-2.0
2,336,043	-		Synpcc7942_2267	0.76	-2.8
2,336,091	-				-2.3
2,336,126	+				-0.2
2,336,126	+				+0.6
2,336,126	+				+0.2