Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2255

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,324,531	+		Synpcc7942_2254	0.83	-0.3
2,324,576	+				+0.4
2,324,591	+		Synpcc7942_2254	0.88	+0.4
2,324,599	-		Synpcc7942_2254	0.88	+0.4
2,324,613	+		Synpcc7942_2254	0.89	+0.2
2,324,624	+				-0.6
2,324,716	-				+1.0
2,324,752	+				-0.9
2,324,759	+				-0.2
2,324,760	-				+0.3
2,324,786	-				-3.3
2,324,799	+				+0.3
2,324,799	+				-1.4
2,324,817	+				+0.8
2,324,839	-				+1.8
2,324,844	-				-0.8
2,324,857	-				+0.8
2,324,863	+				-0.3
2,324,914	+				+1.0
2,324,914	-				-1.7
2,324,944	-				-2.1
2,324,946	+				-0.6
2,324,956	-				-2.9
2,324,968	-				-0.6
2,324,989	+				-2.0
2,324,997	-				+0.4
2,325,005	-				+0.5
2,325,047	-				-1.3
2,325,102	+				+0.2
2,325,184	-				-0.7
2,325,196	+				-1.0
2,325,215	+				-0.9
2,325,284	+				-1.3
2,325,284	+				-1.3
2,325,500	-				-1.8
2,325,704	+		Synpcc7942_2255	0.45	-2.1
2,325,705	+		Synpcc7942_2255	0.46	-1.0
2,325,735	-		Synpcc7942_2255	0.53	-1.8
2,325,798	+		Synpcc7942_2255	0.69	-1.6
2,325,808	+		Synpcc7942_2255	0.71	-0.4
2,325,816	-		Synpcc7942_2255	0.73	-1.4
2,325,857	+		Synpcc7942_2255	0.83	-1.0
2,325,902	+				-3.4
2,325,902	+				-1.5
2,325,902	+				-2.4
2,325,910	-				-2.4
2,325,923	+				-4.0
2,325,928	+				-2.1
2,325,936	-				-3.3
2,325,937	+				-1.6
2,325,950	+				-1.6
2,326,017	+				-0.1
2,326,082	-				-0.6
2,326,084	+				-0.6
2,326,094	-				-1.0
2,326,127	-		Synpcc7942_2256	0.12	-0.7
2,326,143	+		Synpcc7942_2256	0.15	-1.8
2,326,165	+		Synpcc7942_2256	0.19	-0.3
2,326,193	+		Synpcc7942_2256	0.24	-1.3
2,326,193	+		Synpcc7942_2256	0.24	-0.5
2,326,216	-		Synpcc7942_2256	0.28	+0.2
2,326,226	+		Synpcc7942_2256	0.30	-0.1
2,326,269	+		Synpcc7942_2256	0.37	+0.3
2,326,283	+		Synpcc7942_2256	0.40	+0.2
2,326,291	-		Synpcc7942_2256	0.41	-1.4
2,326,298	+				+0.4
2,326,315	+		Synpcc7942_2256	0.46	-0.2
2,326,323	-		Synpcc7942_2256	0.47	-0.9
2,326,323	-		Synpcc7942_2256	0.47	-1.1
2,326,323	-		Synpcc7942_2256	0.47	-1.3
2,326,325	-		Synpcc7942_2256	0.48	+0.8
2,326,328	-		Synpcc7942_2256	0.48	-0.7
2,326,359	+		Synpcc7942_2256	0.54	-1.7
2,326,359	+		Synpcc7942_2256	0.54	+0.1
2,326,359	+		Synpcc7942_2256	0.54	+0.2
2,326,359	+		Synpcc7942_2256	0.54	-0.8
2,326,359	+		Synpcc7942_2256	0.54	-1.7
2,326,359	+		Synpcc7942_2256	0.54	-1.1
2,326,359	+		Synpcc7942_2256	0.54	-0.8
2,326,359	+		Synpcc7942_2256	0.54	-0.7
2,326,359	+		Synpcc7942_2256	0.54	+0.3
2,326,359	+		Synpcc7942_2256	0.54	-0.0
2,326,359	+		Synpcc7942_2256	0.54	+0.0
2,326,359	+		Synpcc7942_2256	0.54	-0.0
2,326,359	+		Synpcc7942_2256	0.54	+0.5
2,326,359	+		Synpcc7942_2256	0.54	+0.0
2,326,359	+		Synpcc7942_2256	0.54	+0.6
2,326,359	+		Synpcc7942_2256	0.54	+0.8
2,326,359	+		Synpcc7942_2256	0.54	-0.7
2,326,359	+		Synpcc7942_2256	0.54	-0.3
2,326,359	+		Synpcc7942_2256	0.54	+1.3
2,326,367	-		Synpcc7942_2256	0.55	-1.8
2,326,367	-		Synpcc7942_2256	0.55	+1.0
2,326,367	-		Synpcc7942_2256	0.55	+0.6
2,326,367	-		Synpcc7942_2256	0.55	-1.3
2,326,367	-		Synpcc7942_2256	0.55	-2.1
2,326,367	-		Synpcc7942_2256	0.55	+0.0
2,326,367	-		Synpcc7942_2256	0.55	+0.5
2,326,367	-		Synpcc7942_2256	0.55	+1.6
2,326,367	-		Synpcc7942_2256	0.55	-0.0
2,326,367	-		Synpcc7942_2256	0.55	+0.8
2,326,367	-		Synpcc7942_2256	0.55	-0.3
2,326,367	-		Synpcc7942_2256	0.55	-0.6
2,326,367	-		Synpcc7942_2256	0.55	+0.8
2,326,367	-		Synpcc7942_2256	0.55	-1.0
2,326,385	-		Synpcc7942_2256	0.58	-0.6
2,326,411	-		Synpcc7942_2256	0.63	-0.4
2,326,417	+		Synpcc7942_2256	0.64	-0.9
2,326,417	-		Synpcc7942_2256	0.64	-1.4
2,326,445	-		Synpcc7942_2256	0.69	-1.6
2,326,449	-		Synpcc7942_2256	0.70	-1.1
2,326,487	-		Synpcc7942_2256	0.77	-1.2
2,326,525	-		Synpcc7942_2256	0.84	+0.2
2,326,536	-		Synpcc7942_2256	0.86	+0.5
2,326,536	-				+0.6
2,326,536	-		Synpcc7942_2256	0.86	-0.9
2,326,564	+				-0.0
2,326,586	-				-1.2
2,326,646	-				+0.1
2,326,671	-				-0.9
2,326,710	-		Synpcc7942_2257	0.27	-0.9
2,326,767	+		Synpcc7942_2257	0.61	-0.5
2,326,811	+		Synpcc7942_2257	0.87	+1.0
2,326,875	+				-0.2
2,326,893	-				-0.9
2,326,915	+				-0.2