Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2251

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,317,365	+	recF	Synpcc7942_2250	0.25	-1.0
2,317,428	+	recF	Synpcc7942_2250	0.30	+0.5
2,317,538	+	recF	Synpcc7942_2250	0.40	-1.0
2,317,552	+	recF	Synpcc7942_2250	0.41	-0.6
2,317,639	+	recF	Synpcc7942_2250	0.48	+0.6
2,317,724	-	recF	Synpcc7942_2250	0.56	-1.4
2,317,751	+	recF	Synpcc7942_2250	0.58	-0.6
2,317,821	+	recF	Synpcc7942_2250	0.64	+1.2
2,318,096	+	recF	Synpcc7942_2250	0.88	+1.5
2,318,217	+				+1.2
2,318,225	-				-2.1
2,318,259	+				-1.1
2,318,267	-				+0.1
2,318,269	+				-0.4
2,318,290	-				-0.0
2,318,290	-				+0.0
2,318,290	-				+1.8
2,318,383	-				-1.9
2,318,420	-		Synpcc7942_2251	0.15	-0.9
2,318,477	+		Synpcc7942_2251	0.24	-0.8
2,318,477	+		Synpcc7942_2251	0.24	-0.0
2,318,485	-		Synpcc7942_2251	0.26	+0.4
2,318,485	-		Synpcc7942_2251	0.26	-0.8
2,318,485	-		Synpcc7942_2251	0.26	-0.3
2,318,485	-		Synpcc7942_2251	0.26	-0.4
2,318,485	-		Synpcc7942_2251	0.26	-1.0
2,318,485	-		Synpcc7942_2251	0.26	-0.0
2,318,485	-		Synpcc7942_2251	0.26	+0.5
2,318,518	+		Synpcc7942_2251	0.31	-0.9
2,318,560	+		Synpcc7942_2251	0.38	-1.7
2,318,560	+		Synpcc7942_2251	0.38	-1.3
2,318,560	-		Synpcc7942_2251	0.38	-1.1
2,318,568	-		Synpcc7942_2251	0.40	-1.6
2,318,568	-		Synpcc7942_2251	0.40	-0.8
2,318,590	+		Synpcc7942_2251	0.44	-2.4
2,318,598	-		Synpcc7942_2251	0.45	-3.0
2,318,604	+		Synpcc7942_2251	0.46	-1.6
2,318,628	-		Synpcc7942_2251	0.50	-1.9
2,318,653	-		Synpcc7942_2251	0.54	-1.0
2,318,667	-		Synpcc7942_2251	0.57	-1.6
2,318,675	-		Synpcc7942_2251	0.58	-0.3
2,318,691	+		Synpcc7942_2251	0.61	-0.8
2,318,699	+		Synpcc7942_2251	0.62	-1.0
2,318,699	-		Synpcc7942_2251	0.62	-0.6
2,318,716	+		Synpcc7942_2251	0.65	-2.7
2,318,765	+		Synpcc7942_2251	0.74	-0.3
2,318,772	-		Synpcc7942_2251	0.75	-1.3
2,318,773	-		Synpcc7942_2251	0.75	-1.3
2,318,778	-		Synpcc7942_2251	0.76	-1.2
2,318,813	+				-1.0
2,318,854	-		Synpcc7942_2251	0.89	-1.5
2,318,870	-				-1.4
2,318,932	-				+0.6