Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2249

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,315,063	-				-0.5
2,315,086	+				+1.6
2,315,086	+				+0.6
2,315,086	+				-0.0
2,315,094	-				-0.4
2,315,094	-				-0.7
2,315,110	+				+0.4
2,315,119	+				+0.2
2,315,137	-				+0.2
2,315,144	+				-2.5
2,315,169	+				-0.0
2,315,182	-				+1.4
2,315,182	-				-0.2
2,315,201	-				-1.1
2,315,233	-				-0.0
2,315,258	+				-0.8
2,315,278	+				-1.2
2,315,288	+				+0.8
2,315,288	-				+0.1
2,315,322	+				+0.4
2,315,322	+				+0.5
2,315,341	+				+0.1
2,315,348	+				-1.3
2,315,365	-				+0.5
2,315,879	-				-1.5
2,315,924	-				-2.2
2,315,936	-				-2.5
2,315,936	-				-2.2
2,315,962	+				-0.2
2,315,970	-				-1.3
2,315,991	+				-0.2
2,316,045	+				-1.3
2,316,065	+				-3.6
2,316,065	+				-0.7
2,316,081	+				-2.3
2,316,130	-		Synpcc7942_2249	0.16	-1.7
2,316,130	-		Synpcc7942_2249	0.16	-1.3
2,316,134	+		Synpcc7942_2249	0.17	-0.8
2,316,134	+		Synpcc7942_2249	0.17	-2.6
2,316,134	+		Synpcc7942_2249	0.17	-3.4
2,316,185	-		Synpcc7942_2249	0.29	-2.7
2,316,187	+		Synpcc7942_2249	0.29	-2.1
2,316,209	+		Synpcc7942_2249	0.35	-0.4
2,316,242	+		Synpcc7942_2249	0.42	-2.0
2,316,264	+		Synpcc7942_2249	0.47	-1.7
2,316,275	+		Synpcc7942_2249	0.50	-1.6
2,316,275	+		Synpcc7942_2249	0.50	+0.2
2,316,283	-		Synpcc7942_2249	0.52	-1.5
2,316,283	-		Synpcc7942_2249	0.52	-1.6
2,316,285	-		Synpcc7942_2249	0.52	-3.1
2,316,362	-		Synpcc7942_2249	0.70	-1.6
2,316,381	+		Synpcc7942_2249	0.75	-1.0
2,316,395	+		Synpcc7942_2249	0.78	-0.4
2,316,405	+		Synpcc7942_2249	0.81	-2.0
2,316,430	+		Synpcc7942_2249	0.86	-1.1
2,316,451	+				-2.9
2,316,451	+				-1.8
2,316,451	+				-1.0
2,316,459	-				-1.5
2,316,459	-				-0.9
2,316,471	+				-2.4
2,316,479	-				-0.6
2,316,493	-				-0.9
2,316,502	-				+0.2
2,316,530	+				-0.6
2,316,530	+				-0.6
2,316,531	+				+0.3
2,316,531	+				-0.9
2,316,573	-				-0.3
2,316,593	+				-1.3
2,316,593	+				-0.3
2,316,624	+				-1.1
2,316,666	-				-0.5
2,316,668	+				-0.6
2,316,672	+				+0.1
2,316,676	-				-1.0
2,316,710	-				-0.3
2,316,711	-				-0.3
2,316,735	+				-1.1
2,316,735	+				-0.1
2,316,735	+				-0.4
2,316,735	+				-0.3
2,316,743	-				+0.7
2,316,743	-				+1.0
2,316,743	-				-1.0
2,316,782	+				-0.5
2,316,794	+				-1.6
2,316,794	+				-1.6
2,316,802	-				-2.2
2,316,802	-				+0.1
2,316,820	+				-0.6
2,316,827	+				-0.1
2,316,886	+				-0.0
2,316,895	-				+0.0
2,316,944	-				-0.1
2,316,967	+				-0.3
2,316,967	+				-1.2
2,316,975	-				-0.1
2,316,975	-				+0.0
2,316,977	+				+0.1
2,317,004	+				+0.1
2,317,012	+				+0.1
2,317,012	-				-0.3
2,317,022	-				+0.1
2,317,027	+				+1.4
2,317,041	-				-2.4
2,317,041	-				+0.0
2,317,050	+				-0.5
2,317,060	+				+1.4
2,317,068	-				-2.0
2,317,081	+				+0.4
2,317,117	+				+0.6
2,317,135	-				-1.7
2,317,135	-				-2.6
2,317,135	-				-0.8
2,317,162	+				+1.0
2,317,162	+				+0.3
2,317,163	-				+0.8
2,317,281	-	recF	Synpcc7942_2250	0.18	+0.7
2,317,331	-	recF	Synpcc7942_2250	0.22	+0.3
2,317,365	+	recF	Synpcc7942_2250	0.25	-1.0
2,317,428	+	recF	Synpcc7942_2250	0.30	+0.5