Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2244

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,308,797	+	proA	Synpcc7942_2243	0.44	+2.7
2,308,797	+	proA	Synpcc7942_2243	0.44	+3.5
2,308,814	-	proA	Synpcc7942_2243	0.45	+2.7
2,308,829	-	proA	Synpcc7942_2243	0.46	+3.0
2,308,834	+	proA	Synpcc7942_2243	0.47	+0.5
2,308,845	+	proA	Synpcc7942_2243	0.48	+3.3
2,308,853	-	proA	Synpcc7942_2243	0.48	+2.5
2,308,920	-	proA	Synpcc7942_2243	0.54	+3.2
2,308,937	+	proA	Synpcc7942_2243	0.55	+2.9
2,308,955	-	proA	Synpcc7942_2243	0.56	+3.2
2,308,956	-	proA	Synpcc7942_2243	0.56	+3.1
2,308,967	+	proA	Synpcc7942_2243	0.57	+2.2
2,309,005	+	proA	Synpcc7942_2243	0.60	-0.8
2,309,047	+	proA	Synpcc7942_2243	0.64	+2.6
2,309,066	-	proA	Synpcc7942_2243	0.65	+3.0
2,309,125	-	proA	Synpcc7942_2243	0.70	+2.9
2,309,143	-	proA	Synpcc7942_2243	0.71	-0.2
2,309,157	+	proA	Synpcc7942_2243	0.73	+3.1
2,309,157	+	proA	Synpcc7942_2243	0.73	+3.1
2,309,157	-	proA	Synpcc7942_2243	0.73	+5.3
2,309,163	+	proA	Synpcc7942_2243	0.73	+3.3
2,309,165	-	proA	Synpcc7942_2243	0.73	+3.4
2,309,177	-	proA	Synpcc7942_2243	0.74	+4.4
2,309,236	+	proA	Synpcc7942_2243	0.79	-0.5
2,309,287	+	proA	Synpcc7942_2243	0.83	+3.4
2,309,287	+	proA	Synpcc7942_2243	0.83	+2.8
2,309,295	-	proA	Synpcc7942_2243	0.84	+3.5
2,309,295	-	proA	Synpcc7942_2243	0.84	+2.8
2,309,320	+	proA	Synpcc7942_2243	0.86	+2.3
2,309,337	+	proA	Synpcc7942_2243	0.87	+2.7
2,309,387	+				+3.1
2,309,395	-				+3.1
2,309,399	+				+3.0
2,309,407	+				+3.4
2,309,427	+				+3.8
2,309,428	+				-2.0
2,309,434	-				+3.2
2,309,436	-				+3.3
2,309,457	+				+2.1
2,309,557	+				+1.0
2,309,565	-				+1.4
2,309,569	+				-1.1
2,309,574	+				+0.7
2,309,577	-				+0.3
2,309,577	-				-0.6
2,309,584	-				+1.0
2,310,389	+	psbZ	Synpcc7942_2245	0.24	-2.1
2,310,497	+	psbZ	Synpcc7942_2245	0.81	-3.0
2,310,545	+				-1.0
2,310,665	-				-1.2
2,310,680	+				-0.5
2,310,685	+				-0.1
2,310,692	-				+0.6
2,310,773	-				+0.1
2,310,822	+				-1.4
2,310,845	+				-2.8
2,310,845	+				-0.9
2,310,845	+				-0.3
2,310,845	+				-1.1
2,310,845	+				-1.4
2,310,853	-				-1.3
2,310,853	-				-1.4
2,310,853	-				-0.6
2,310,853	-				-0.6
2,310,867	-				-0.2
2,310,869	+				-0.1
2,310,911	+		Synpcc7942_2246	0.11	-1.5
2,310,924	-		Synpcc7942_2246	0.12	-0.3
2,310,935	+		Synpcc7942_2246	0.13	-1.4
2,310,942	+		Synpcc7942_2246	0.13	-2.2
2,310,942	+		Synpcc7942_2246	0.13	-1.0
2,310,942	+		Synpcc7942_2246	0.13	-3.0
2,310,950	-		Synpcc7942_2246	0.14	-2.2
2,310,972	+		Synpcc7942_2246	0.15	-0.6
2,310,984	+		Synpcc7942_2246	0.16	-0.6
2,310,984	+		Synpcc7942_2246	0.16	-1.3
2,311,030	+		Synpcc7942_2246	0.19	-1.8
2,311,030	+		Synpcc7942_2246	0.19	-2.0
2,311,038	-		Synpcc7942_2246	0.19	-3.5
2,311,092	-		Synpcc7942_2246	0.23	-1.2
2,311,144	+		Synpcc7942_2246	0.26	-1.8
2,311,144	+		Synpcc7942_2246	0.26	-1.4
2,311,200	+		Synpcc7942_2246	0.30	-0.9
2,311,210	+		Synpcc7942_2246	0.30	-0.3
2,311,210	+		Synpcc7942_2246	0.30	-0.6
2,311,213	-		Synpcc7942_2246	0.30	-0.6
2,311,330	+		Synpcc7942_2246	0.38	-0.4
2,311,330	+		Synpcc7942_2246	0.38	-1.3