Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2185

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,262,477	+				-1.1
2,262,493	+				+1.9
2,262,500	+				-0.7
2,262,500	+				+0.4
2,262,500	+				+1.1
2,262,508	-				-0.8
2,262,535	-				+1.1
2,262,535	-				+0.5
2,262,538	-				+1.8
2,262,552	+				+0.7
2,262,570	-				+0.6
2,262,600	+		Synpcc7942_2184	0.10	-1.0
2,262,620	+		Synpcc7942_2184	0.13	+1.0
2,262,620	+		Synpcc7942_2184	0.13	+1.7
2,262,628	-		Synpcc7942_2184	0.14	+0.8
2,262,638	-		Synpcc7942_2184	0.15	+0.8
2,262,641	-		Synpcc7942_2184	0.15	+1.3
2,262,656	+		Synpcc7942_2184	0.17	+1.3
2,262,669	+		Synpcc7942_2184	0.19	+0.5
2,262,699	+		Synpcc7942_2184	0.23	-0.0
2,262,727	+		Synpcc7942_2184	0.26	+1.6
2,262,727	+		Synpcc7942_2184	0.26	+1.7
2,262,766	+		Synpcc7942_2184	0.31	+0.5
2,262,766	+		Synpcc7942_2184	0.31	+1.7
2,262,789	-		Synpcc7942_2184	0.34	+1.4
2,262,793	+		Synpcc7942_2184	0.34	+0.7
2,262,801	-		Synpcc7942_2184	0.35	-0.6
2,262,802	-		Synpcc7942_2184	0.35	+1.3
2,262,852	+		Synpcc7942_2184	0.42	-1.3
2,262,852	+		Synpcc7942_2184	0.42	+0.7
2,262,852	+		Synpcc7942_2184	0.42	+0.4
2,262,866	+		Synpcc7942_2184	0.43	+0.8
2,262,870	-		Synpcc7942_2184	0.44	+1.4
2,262,878	+		Synpcc7942_2184	0.45	+1.1
2,262,878	+		Synpcc7942_2184	0.45	+1.3
2,262,920	+		Synpcc7942_2184	0.50	+2.3
2,262,920	+		Synpcc7942_2184	0.50	+1.4
2,262,928	-		Synpcc7942_2184	0.51	+1.1
2,262,933	-		Synpcc7942_2184	0.52	+1.3
2,262,933	-		Synpcc7942_2184	0.52	-0.3
2,262,950	+		Synpcc7942_2184	0.54	+0.1
2,262,953	-		Synpcc7942_2184	0.54	+0.3
2,262,965	-		Synpcc7942_2184	0.56	-0.0
2,262,970	+		Synpcc7942_2184	0.56	+0.1
2,262,980	+		Synpcc7942_2184	0.58	+0.2
2,262,983	-		Synpcc7942_2184	0.58	+1.6
2,263,048	-		Synpcc7942_2184	0.66	-1.6
2,263,059	+				+0.8
2,263,061	+		Synpcc7942_2184	0.68	+0.5
2,263,069	-		Synpcc7942_2184	0.69	+1.5
2,263,082	+		Synpcc7942_2184	0.70	+0.8
2,263,090	-		Synpcc7942_2184	0.71	-1.3
2,263,090	-		Synpcc7942_2184	0.71	-0.5
2,263,109	+		Synpcc7942_2184	0.74	+1.0
2,263,109	+		Synpcc7942_2184	0.74	+1.5
2,263,110	-		Synpcc7942_2184	0.74	+1.4
2,263,110	-		Synpcc7942_2184	0.74	+1.4
2,263,117	-		Synpcc7942_2184	0.75	+1.5
2,263,117	-		Synpcc7942_2184	0.75	+0.7
2,263,123	-		Synpcc7942_2184	0.76	+1.3
2,263,137	+		Synpcc7942_2184	0.77	-0.9
2,263,156	-		Synpcc7942_2184	0.80	+1.4
2,263,169	+		Synpcc7942_2184	0.81	+0.8
2,263,189	-		Synpcc7942_2184	0.84	+1.2
2,263,191	-		Synpcc7942_2184	0.84	+0.2
2,263,222	+		Synpcc7942_2184	0.88	+1.3
2,263,232	+		Synpcc7942_2184	0.89	-0.3
2,263,255	+				+3.0
2,263,268	+				+0.2
2,263,268	+				+1.5
2,263,273	+				+0.5
2,263,294	-				+0.7
2,263,295	-				+1.2
2,263,313	+				-1.8
2,263,319	-				-1.1
2,263,323	+				+0.7
2,263,351	+				+0.4
2,263,351	+				+0.1
2,263,351	+				+0.4
2,263,359	-				-0.9
2,263,359	-				+0.3
2,263,401	-				+0.7
2,263,409	+				+0.5
2,263,410	-				+0.7
2,263,444	-		Synpcc7942_2185	0.10	-1.6
2,263,490	-		Synpcc7942_2185	0.21	+0.2
2,263,517	+		Synpcc7942_2185	0.28	-0.5
2,263,533	-		Synpcc7942_2185	0.32	-1.6
2,263,533	-		Synpcc7942_2185	0.32	-0.1
2,263,660	+		Synpcc7942_2185	0.63	+0.1
2,263,660	+		Synpcc7942_2185	0.63	-0.5
2,263,668	-		Synpcc7942_2185	0.65	-0.2
2,263,742	+		Synpcc7942_2185	0.84	+0.8
2,263,785	+				-1.9
2,263,810	-				+0.3
2,263,861	+				+0.1
2,263,879	-				+0.4
2,263,895	+				+1.5
2,263,914	+				+0.2
2,263,915	-				-0.3
2,263,922	-				-2.1
2,263,924	+				-0.1
2,263,932	-				-0.9
2,263,932	-				+0.6
2,263,932	-				+1.1
2,263,932	-				+0.5
2,263,937	+				-0.3
2,263,937	+				-2.3
2,263,937	+				+1.1
2,263,945	-				+0.3
2,263,945	-				-1.8
2,263,945	-				+1.3
2,263,947	-				+0.5
2,263,962	+				+0.4
2,263,985	+				+0.6
2,263,985	+				-1.8
2,263,993	-				-0.2
2,264,001	+				+0.8
2,264,003	+				-1.6
2,264,028	-				-0.6
2,264,053	+				-0.6
2,264,062	+				-1.3
2,264,067	+				+0.2
2,264,073	+				+0.4
2,264,119	+				-0.9
2,264,143	+				-0.4
2,264,146	-				-0.5
2,264,178	+				+0.2
2,264,192	+				+0.3
2,264,203	+				+0.3
2,264,204	-				+1.0
2,264,209	+				-0.7
2,264,209	+				-0.1
2,264,245	+	nha7	Synpcc7942_2186	0.11	-0.3
2,264,245	+	nha7	Synpcc7942_2186	0.11	-2.0
2,264,245	+	nha7	Synpcc7942_2186	0.11	+0.2
2,264,267	+	nha7	Synpcc7942_2186	0.12	+0.2
2,264,267	+	nha7	Synpcc7942_2186	0.12	+0.9
2,264,267	+	nha7	Synpcc7942_2186	0.12	-0.5
2,264,267	+	nha7	Synpcc7942_2186	0.12	-1.8
2,264,275	-	nha7	Synpcc7942_2186	0.12	-1.2
2,264,275	-	nha7	Synpcc7942_2186	0.12	-0.1
2,264,277	+	nha7	Synpcc7942_2186	0.12	-2.0
2,264,287	-	nha7	Synpcc7942_2186	0.13	+0.9
2,264,299	+	nha7	Synpcc7942_2186	0.14	-0.2
2,264,311	-	nha7	Synpcc7942_2186	0.15	-2.0
2,264,322	-	nha7	Synpcc7942_2186	0.15	-0.3
2,264,325	-	nha7	Synpcc7942_2186	0.15	+0.0
2,264,358	+	nha7	Synpcc7942_2186	0.17	+0.4
2,264,366	-	nha7	Synpcc7942_2186	0.18	-0.1
2,264,381	+	nha7	Synpcc7942_2186	0.19	+0.9
2,264,413	-	nha7	Synpcc7942_2186	0.21	-0.7
2,264,418	+	nha7	Synpcc7942_2186	0.21	-2.6
2,264,428	-	nha7	Synpcc7942_2186	0.22	+0.3
2,264,462	-	nha7	Synpcc7942_2186	0.24	-0.6
2,264,468	-	nha7	Synpcc7942_2186	0.24	-0.3
2,264,471	+	nha7	Synpcc7942_2186	0.24	-0.4
2,264,479	-	nha7	Synpcc7942_2186	0.25	+0.2
2,264,491	+	nha7	Synpcc7942_2186	0.26	+0.5
2,264,499	-	nha7	Synpcc7942_2186	0.26	-0.8
2,264,499	-	nha7	Synpcc7942_2186	0.26	-0.3
2,264,499	-	nha7	Synpcc7942_2186	0.26	+1.8
2,264,508	+	nha7	Synpcc7942_2186	0.27	+0.5
2,264,509	-	nha7	Synpcc7942_2186	0.27	+0.8
2,264,540	-	nha7	Synpcc7942_2186	0.29	+1.2
2,264,591	+	nha7	Synpcc7942_2186	0.32	-0.1
2,264,592	+	nha7	Synpcc7942_2186	0.32	+0.7
2,264,600	-	nha7	Synpcc7942_2186	0.32	-3.3
2,264,605	-	nha7	Synpcc7942_2186	0.32	+1.1
2,264,609	+	nha7	Synpcc7942_2186	0.33	-1.1
2,264,617	-	nha7	Synpcc7942_2186	0.33	+0.7
2,264,619	-	nha7	Synpcc7942_2186	0.33	+1.1
2,264,625	+	nha7	Synpcc7942_2186	0.34	+0.4
2,264,633	-	nha7	Synpcc7942_2186	0.34	+0.2
2,264,633	-	nha7	Synpcc7942_2186	0.34	-0.8
2,264,639	-	nha7	Synpcc7942_2186	0.35	-0.3
2,264,673	+	nha7	Synpcc7942_2186	0.37	-0.3
2,264,694	+	nha7	Synpcc7942_2186	0.38	+0.4
2,264,694	+	nha7	Synpcc7942_2186	0.38	+0.4
2,264,694	+	nha7	Synpcc7942_2186	0.38	+1.1
2,264,704	+	nha7	Synpcc7942_2186	0.39	-2.6
2,264,718	+	nha7	Synpcc7942_2186	0.39	-0.5
2,264,747	-	nha7	Synpcc7942_2186	0.41	+0.5
2,264,752	+	nha7	Synpcc7942_2186	0.41	+1.3
2,264,752	+	nha7	Synpcc7942_2186	0.41	+1.0
2,264,760	-	nha7	Synpcc7942_2186	0.42	-0.0
2,264,785	-	nha7	Synpcc7942_2186	0.43	-2.5
2,264,785	-	nha7	Synpcc7942_2186	0.43	-1.0
2,264,800	+	nha7	Synpcc7942_2186	0.44	-1.7
2,264,800	+	nha7	Synpcc7942_2186	0.44	+0.8
2,264,800	+	nha7	Synpcc7942_2186	0.44	+0.1