Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2182

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,260,257	-		Synpcc7942_2181	0.23	-1.6
2,260,410	-		Synpcc7942_2181	0.35	-1.5
2,260,426	+		Synpcc7942_2181	0.37	-2.8
2,260,488	-		Synpcc7942_2181	0.42	-2.0
2,260,546	+		Synpcc7942_2181	0.47	-1.6
2,260,624	+		Synpcc7942_2181	0.53	-0.6
2,260,646	-		Synpcc7942_2181	0.55	-3.3
2,260,648	-		Synpcc7942_2181	0.55	+2.7
2,260,674	+		Synpcc7942_2181	0.57	-2.2
2,260,696	+		Synpcc7942_2181	0.59	+0.5
2,260,696	+		Synpcc7942_2181	0.59	-0.6
2,260,796	-		Synpcc7942_2181	0.67	-2.0
2,260,827	+		Synpcc7942_2181	0.70	-2.2
2,260,845	-		Synpcc7942_2181	0.71	-2.8
2,260,980	-		Synpcc7942_2181	0.83	-3.0
2,260,993	-		Synpcc7942_2181	0.84	-2.0
2,260,997	+		Synpcc7942_2181	0.84	-2.1
2,260,997	+		Synpcc7942_2181	0.84	-2.8
2,261,005	-		Synpcc7942_2181	0.85	-1.0
2,261,024	+		Synpcc7942_2181	0.86	-0.8
2,261,051	-		Synpcc7942_2181	0.88	-1.6
2,261,051	-		Synpcc7942_2181	0.88	-2.5
2,261,096	-				-0.6
2,261,145	-				-2.7
2,261,164	-				-2.2
2,261,183	+				+0.4
2,261,187	+				+0.5
2,261,194	+				+1.8
2,261,256	+				+0.5
2,261,341	+		Synpcc7942_2182	0.52	+1.1
2,261,348	+		Synpcc7942_2182	0.56	+0.6
2,261,356	-		Synpcc7942_2182	0.60	-0.2
2,261,431	+				+0.1
2,261,431	+				-0.2
2,261,433	+				+0.3
2,261,519	+				+0.5
2,261,527	-				+1.4
2,261,527	-				+1.6
2,261,537	-				+1.0
2,261,553	+				+0.5
2,261,555	+				+0.6
2,261,561	-				+0.3
2,261,593	+				+1.0
2,261,612	+				+2.2
2,261,615	+				+2.2
2,261,667	-	rnhA	Synpcc7942_2183	0.14	+1.4
2,261,674	+	rnhA	Synpcc7942_2183	0.15	+1.2
2,261,675	+	rnhA	Synpcc7942_2183	0.15	+3.0
2,261,681	+	rnhA	Synpcc7942_2183	0.16	+2.0
2,261,698	-	rnhA	Synpcc7942_2183	0.18	+1.9
2,261,698	-	rnhA	Synpcc7942_2183	0.18	+1.8
2,261,756	-	rnhA	Synpcc7942_2183	0.26	+1.6
2,261,773	-	rnhA	Synpcc7942_2183	0.28	+0.4
2,261,785	+	rnhA	Synpcc7942_2183	0.29	+0.8
2,261,786	+	rnhA	Synpcc7942_2183	0.29	+0.4
2,261,791	+	rnhA	Synpcc7942_2183	0.30	+1.3
2,261,798	+	rnhA	Synpcc7942_2183	0.31	+2.3
2,261,801	-	rnhA	Synpcc7942_2183	0.31	+0.5
2,261,801	-	rnhA	Synpcc7942_2183	0.31	+0.9
2,261,810	+	rnhA	Synpcc7942_2183	0.33	+1.3
2,261,846	+	rnhA	Synpcc7942_2183	0.37	+1.1
2,261,908	-	rnhA	Synpcc7942_2183	0.45	+0.5
2,261,970	+	rnhA	Synpcc7942_2183	0.53	+0.2
2,261,970	+	rnhA	Synpcc7942_2183	0.53	-0.0
2,261,978	-	rnhA	Synpcc7942_2183	0.54	-0.3
2,261,983	+	rnhA	Synpcc7942_2183	0.55	+0.7
2,261,996	+	rnhA	Synpcc7942_2183	0.56	-0.4
2,262,024	+	rnhA	Synpcc7942_2183	0.60	-0.0
2,262,031	+	rnhA	Synpcc7942_2183	0.61	-1.3
2,262,031	+	rnhA	Synpcc7942_2183	0.61	-0.2
2,262,063	-	rnhA	Synpcc7942_2183	0.65	+0.2
2,262,071	+	rnhA	Synpcc7942_2183	0.66	-0.1
2,262,071	-	rnhA	Synpcc7942_2183	0.66	-0.1
2,262,077	+	rnhA	Synpcc7942_2183	0.67	+0.5
2,262,077	+	rnhA	Synpcc7942_2183	0.67	-1.7
2,262,085	-	rnhA	Synpcc7942_2183	0.68	-1.3
2,262,085	-	rnhA	Synpcc7942_2183	0.68	-0.3
2,262,088	-	rnhA	Synpcc7942_2183	0.68	-3.3
2,262,091	+	rnhA	Synpcc7942_2183	0.69	-0.8
2,262,115	+	rnhA	Synpcc7942_2183	0.72	+0.4
2,262,123	-	rnhA	Synpcc7942_2183	0.73	+0.0
2,262,123	-	rnhA	Synpcc7942_2183	0.73	-0.0
2,262,125	-	rnhA	Synpcc7942_2183	0.73	-0.1
2,262,140	-	rnhA	Synpcc7942_2183	0.75	-0.0
2,262,159	+	rnhA	Synpcc7942_2183	0.77	-0.0
2,262,195	+	rnhA	Synpcc7942_2183	0.82	-0.9
2,262,211	+	rnhA	Synpcc7942_2183	0.84	+0.3
2,262,225	-	rnhA	Synpcc7942_2183	0.86	+1.8
2,262,263	+				+0.8
2,262,263	+				-0.2
2,262,278	+				-0.0
2,262,278	+				-0.1
2,262,278	+				-1.8
2,262,278	+				-3.0
2,262,278	+				+0.1
2,262,278	+				+0.3
2,262,278	+				-0.0
2,262,278	+				-1.2
2,262,278	+				-1.5
2,262,278	+				-0.5
2,262,278	+				-0.2
2,262,283	+				-0.9
2,262,286	-				+1.0
2,262,286	-				-0.1
2,262,286	-				-0.2
2,262,286	-				-0.1
2,262,286	-				+0.4
2,262,307	+				-1.1
2,262,307	+				+0.5
2,262,334	-				-0.0
2,262,353	-				+0.1