Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2085

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,165,729	+				-0.1
2,165,831	+		Synpcc7942_2085	0.14	-0.0
2,165,913	+		Synpcc7942_2085	0.21	-0.2
2,165,921	-		Synpcc7942_2085	0.22	-1.8
2,165,934	+		Synpcc7942_2085	0.23	-0.9
2,165,951	-		Synpcc7942_2085	0.25	-1.0
2,166,010	-		Synpcc7942_2085	0.30	-3.4
2,166,082	-		Synpcc7942_2085	0.37	-1.5
2,166,082	-		Synpcc7942_2085	0.37	-0.9
2,166,107	+		Synpcc7942_2085	0.39	-0.5
2,166,167	+		Synpcc7942_2085	0.45	-3.7
2,166,198	+		Synpcc7942_2085	0.48	-0.2
2,166,206	-		Synpcc7942_2085	0.49	+1.3
2,166,242	+		Synpcc7942_2085	0.52	-1.6
2,166,281	+		Synpcc7942_2085	0.56	-1.1
2,166,340	-		Synpcc7942_2085	0.61	-1.9
2,166,340	-		Synpcc7942_2085	0.61	+0.1
2,166,348	+		Synpcc7942_2085	0.62	-0.2
2,166,356	-		Synpcc7942_2085	0.62	+2.0
2,166,361	-		Synpcc7942_2085	0.63	-1.1
2,166,371	+		Synpcc7942_2085	0.64	-0.8
2,166,379	-		Synpcc7942_2085	0.65	-1.0
2,166,398	+		Synpcc7942_2085	0.66	-0.6
2,166,445	+		Synpcc7942_2085	0.71	+0.2
2,166,456	+		Synpcc7942_2085	0.72	-0.8
2,166,464	-		Synpcc7942_2085	0.73	-0.4
2,166,464	-		Synpcc7942_2085	0.73	-1.1
2,166,464	-		Synpcc7942_2085	0.73	-1.6
2,166,485	+		Synpcc7942_2085	0.74	-2.2
2,166,496	-		Synpcc7942_2085	0.75	-1.9
2,166,564	-				-0.0
2,166,567	+		Synpcc7942_2085	0.82	-2.3
2,166,567	+		Synpcc7942_2085	0.82	+1.0
2,166,567	+		Synpcc7942_2085	0.82	-1.2
2,166,608	+		Synpcc7942_2085	0.86	-0.6
2,166,609	-		Synpcc7942_2085	0.86	-1.4
2,166,626	-		Synpcc7942_2085	0.88	-2.5
2,166,649	+		Synpcc7942_2085	0.90	-0.4
2,166,649	+		Synpcc7942_2085	0.90	-0.1
2,166,682	+				-0.9
2,166,748	+				-0.7
2,166,782	+				-0.6
2,166,782	+				+0.1
2,166,782	+				+0.5
2,166,782	+				+0.5
2,166,782	+				+0.3
2,166,782	+				-0.2
2,166,782	+				+0.1
2,166,788	+				-0.0
2,166,790	-				-0.3
2,166,790	-				-0.1
2,166,868	-		Synpcc7942_2086	0.38	-0.0
2,166,973	+				-1.1
2,167,000	+				-0.0
2,167,002	+				-0.8
2,167,084	-				+0.7
2,167,089	-				+0.7
2,167,115	-				-0.2
2,167,117	-				+0.1
2,167,146	-				+1.7
2,167,146	-				+0.4