Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2059

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,135,714	+				-3.5
2,135,714	+				-1.8
2,135,734	-				-0.4
2,135,752	+				+0.3
2,135,758	+				+0.4
2,135,760	-				+0.9
2,136,672	+				-0.9
2,136,673	+				+1.7
2,136,673	+				+0.1
2,136,673	+				+0.2
2,136,673	+				+0.5
2,136,673	+				-2.5
2,136,675	+				+0.0
2,136,678	+				+0.0
2,136,681	-				-0.2
2,136,681	-				+0.3
2,136,687	+				+0.7
2,136,688	-				-2.6
2,136,697	+				-0.0
2,136,697	+				+0.8
2,136,697	+				-0.2
2,136,697	+				+0.4
2,136,699	+				-1.0
2,136,705	-				+0.3
2,136,705	-				+0.1
2,136,707	+				-2.0
2,136,707	+				-1.9
2,136,715	-				-0.7
2,136,715	-				+0.7
2,136,736	+				-2.1
2,136,736	+				-1.9
2,136,741	+				-2.7
2,136,777	-	cdv2	Synpcc7942_2059	0.14	-2.8
2,136,791	-	cdv2	Synpcc7942_2059	0.16	-1.3
2,136,794	-	cdv2	Synpcc7942_2059	0.17	-0.2
2,136,803	-	cdv2	Synpcc7942_2059	0.18	-2.4
2,136,828	+	cdv2	Synpcc7942_2059	0.23	-1.2
2,136,939	-	cdv2	Synpcc7942_2059	0.42	-0.2
2,136,949	-	cdv2	Synpcc7942_2059	0.44	-1.1
2,137,041	+	cdv2	Synpcc7942_2059	0.60	+1.1
2,137,049	-	cdv2	Synpcc7942_2059	0.61	-1.8
2,137,054	+	cdv2	Synpcc7942_2059	0.62	-2.9
2,137,062	-	cdv2	Synpcc7942_2059	0.63	-4.2
2,137,063	+	cdv2	Synpcc7942_2059	0.64	-1.3
2,137,098	+	cdv2	Synpcc7942_2059	0.70	-2.5
2,137,098	+	cdv2	Synpcc7942_2059	0.70	-1.1
2,137,106	-	cdv2	Synpcc7942_2059	0.71	-1.9
2,137,172	+	cdv2	Synpcc7942_2059	0.82	-0.5
2,137,207	-	cdv2	Synpcc7942_2059	0.89	-0.7
2,137,226	+				-2.4
2,137,276	+				+0.0
2,137,324	-				-0.4
2,137,324	-				-2.8
2,137,336	-				-0.1
2,137,340	+				-0.0
2,137,348	-				-1.4
2,137,348	-				-1.8
2,137,457	+				-1.5
2,137,465	-				+0.4
2,137,465	-				+1.2
2,137,539	-				+1.4
2,137,579	+	ylmE	Synpcc7942_2060	0.11	+3.3
2,137,592	+	ylmE	Synpcc7942_2060	0.13	+2.7
2,137,618	+	ylmE	Synpcc7942_2060	0.17	+2.5
2,137,652	+	ylmE	Synpcc7942_2060	0.22	+2.4
2,137,652	+	ylmE	Synpcc7942_2060	0.22	+1.9
2,137,652	+				+1.2
2,137,721	-	ylmE	Synpcc7942_2060	0.33	+2.8
2,137,726	+	ylmE	Synpcc7942_2060	0.33	+1.9
2,137,734	-	ylmE	Synpcc7942_2060	0.35	+2.3
2,137,734	-				+1.2
2,137,736	+	ylmE	Synpcc7942_2060	0.35	+2.7
2,137,736	+	ylmE	Synpcc7942_2060	0.35	+1.0
2,137,745	+	ylmE	Synpcc7942_2060	0.36	+1.4
2,137,752	+				+1.1
2,137,764	-	ylmE	Synpcc7942_2060	0.39	+1.0
2,137,783	+	ylmE	Synpcc7942_2060	0.42	+0.5
2,137,790	+	ylmE	Synpcc7942_2060	0.43	+2.2
2,137,791	-	ylmE	Synpcc7942_2060	0.43	+2.4
2,137,793	+	ylmE	Synpcc7942_2060	0.43	+1.4
2,137,816	-	ylmE	Synpcc7942_2060	0.47	+2.0
2,137,821	+	ylmE	Synpcc7942_2060	0.48	+2.4
2,137,827	+	ylmE	Synpcc7942_2060	0.48	+1.9
2,137,835	-	ylmE	Synpcc7942_2060	0.50	+1.6
2,137,880	+	ylmE	Synpcc7942_2060	0.56	+2.8
2,137,899	-	ylmE	Synpcc7942_2060	0.59	-3.2
2,137,899	-	ylmE	Synpcc7942_2060	0.59	+2.9
2,137,920	-	ylmE	Synpcc7942_2060	0.62	-0.7
2,137,938	+	ylmE	Synpcc7942_2060	0.65	+0.7
2,137,958	-	ylmE	Synpcc7942_2060	0.68	+1.4
2,137,998	-	ylmE	Synpcc7942_2060	0.74	+2.3
2,137,999	+				+1.1
2,138,049	+	ylmE	Synpcc7942_2060	0.82	+3.0
2,138,065	-	ylmE	Synpcc7942_2060	0.84	+2.0
2,138,107	+				-1.4
2,138,117	-				-1.7
2,138,117	-				-0.4