Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2038

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,106,399	+		Synpcc7942_2036	0.87	+0.2
2,106,407	-		Synpcc7942_2036	0.88	-1.6
2,106,429	-				+0.2
2,106,453	+				+0.3
2,106,505	+				+0.6
2,106,529	-				-0.2
2,106,534	+				-0.1
2,106,544	+				+0.8
2,106,544	+				-1.3
2,106,544	+				+0.3
2,106,546	+				-0.3
2,106,552	-				-0.5
2,106,554	+				+0.5
2,106,556	-				+0.4
2,106,559	+				-0.4
2,106,564	+				-0.1
2,106,564	+				-0.2
2,106,572	+				-0.5
2,106,600	+		Synpcc7942_2037	0.13	+0.2
2,106,609	+		Synpcc7942_2037	0.14	+0.5
2,106,622	-		Synpcc7942_2037	0.16	+0.5
2,106,622	-		Synpcc7942_2037	0.16	+0.4
2,106,625	+		Synpcc7942_2037	0.16	-0.4
2,106,625	+		Synpcc7942_2037	0.16	+0.1
2,106,658	-		Synpcc7942_2037	0.22	-0.1
2,106,658	-		Synpcc7942_2037	0.22	+0.5
2,106,744	-		Synpcc7942_2037	0.35	-1.5
2,106,749	+		Synpcc7942_2037	0.36	+0.8
2,106,749	+		Synpcc7942_2037	0.36	-0.4
2,106,749	+		Synpcc7942_2037	0.36	-0.6
2,106,757	-		Synpcc7942_2037	0.37	+0.7
2,106,811	+		Synpcc7942_2037	0.45	-0.1
2,106,818	+		Synpcc7942_2037	0.46	-0.6
2,106,818	+		Synpcc7942_2037	0.46	-0.8
2,106,818	+		Synpcc7942_2037	0.46	-1.1
2,106,833	+		Synpcc7942_2037	0.49	+0.7
2,106,858	+		Synpcc7942_2037	0.53	+0.6
2,106,882	-		Synpcc7942_2037	0.56	+1.4
2,106,885	+		Synpcc7942_2037	0.57	+0.7
2,106,893	-		Synpcc7942_2037	0.58	+0.3
2,106,922	+		Synpcc7942_2037	0.62	-0.4
2,107,095	+		Synpcc7942_2037	0.89	+0.6
2,107,115	+				+0.1
2,107,116	-				-0.4
2,107,123	-				+0.4
2,107,171	+				-0.3
2,107,224	+				-0.9
2,107,224	+				-1.6
2,107,232	-				-1.7
2,107,239	-				+0.1
2,107,270	+				+0.1
2,107,298	+				-0.1
2,107,298	+				+0.8
2,107,301	-				-0.7
2,107,301	-				-0.1
2,107,301	-				+0.6
2,107,301	-				+0.1
2,107,303	+				+0.2
2,107,303	+				+1.1
2,107,324	-				-1.1
2,107,329	-				+0.5
2,107,329	-				+1.9
2,107,364	+				+0.1
2,107,372	-				-0.1
2,107,682	-		Synpcc7942_2038	0.45	-1.5
2,107,687	-		Synpcc7942_2038	0.46	-1.8
2,107,708	+		Synpcc7942_2038	0.49	-1.8
2,107,805	+		Synpcc7942_2038	0.63	-1.6
2,107,837	-		Synpcc7942_2038	0.68	-3.1
2,107,874	+		Synpcc7942_2038	0.73	-3.0
2,108,056	-				-3.0
2,108,107	+				-2.6
2,108,125	+				-1.5
2,108,222	+				-0.8
2,108,222	+				-0.9
2,108,222	+				-0.1
2,108,224	+				-1.1
2,108,235	-				-1.1
2,108,289	+				-0.8
2,108,297	-				-1.4
2,108,307	+				-0.9
2,108,354	-				-0.3
2,108,391	-				+0.6
2,108,446	-				-0.8
2,108,474	-				+0.3
2,108,483	-				+1.8
2,108,501	+				+0.5
2,108,520	-				+0.5
2,108,525	+				+0.4
2,108,525	+				-0.0
2,108,527	+				+0.0
2,108,540	-				-0.1
2,108,651	+		Synpcc7942_2039	0.15	-0.8
2,108,651	+		Synpcc7942_2039	0.15	+0.9
2,108,661	+		Synpcc7942_2039	0.16	+0.8
2,108,684	+		Synpcc7942_2039	0.19	+0.5
2,108,748	-		Synpcc7942_2039	0.27	-0.6
2,108,759	-		Synpcc7942_2039	0.28	+0.1
2,108,766	+		Synpcc7942_2039	0.29	+1.5
2,108,766	+		Synpcc7942_2039	0.29	+1.2
2,108,774	-		Synpcc7942_2039	0.30	-0.4
2,108,774	-		Synpcc7942_2039	0.30	+0.5
2,108,796	-		Synpcc7942_2039	0.33	-2.4
2,108,855	-		Synpcc7942_2039	0.40	+0.8
2,108,928	-				+0.2
2,108,942	-		Synpcc7942_2039	0.51	-0.6