Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2019

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,084,949	-				+0.2
2,084,964	+				-1.3
2,084,972	-				+0.7
2,084,972	-				-0.3
2,085,002	+				-0.1
2,085,010	-				-0.4
2,085,014	+				-0.4
2,085,046	+				+0.6
2,085,053	-				-0.6
2,085,413	-				-0.6
2,085,564	-				-1.6
2,085,616	+		Synpcc7942_2018	0.13	-1.1
2,085,630	-		Synpcc7942_2018	0.19	-0.2
2,085,741	+		Synpcc7942_2018	0.64	+1.3
2,085,751	+		Synpcc7942_2018	0.68	+1.1
2,085,784	-		Synpcc7942_2018	0.81	+1.0
2,085,825	-				-0.1
2,085,831	+				+0.4
2,085,839	-				+0.1
2,085,852	-				-0.9
2,085,883	+				+0.2
2,085,885	-				-0.2
2,085,899	-				+0.6
2,085,907	+				-0.4
2,085,913	-				-0.5
2,085,913	-				-0.6
2,086,026	+		Synpcc7942_2019	0.15	-1.4
2,086,026	+				-1.5
2,086,155	-		Synpcc7942_2019	0.30	+0.4
2,086,184	+		Synpcc7942_2019	0.33	-2.1
2,086,184	+		Synpcc7942_2019	0.33	-1.6
2,086,192	-		Synpcc7942_2019	0.34	-1.6
2,086,231	-		Synpcc7942_2019	0.39	-1.7
2,086,252	-		Synpcc7942_2019	0.41	-2.4
2,086,273	+		Synpcc7942_2019	0.44	-2.2
2,086,273	+		Synpcc7942_2019	0.44	-3.1
2,086,301	+		Synpcc7942_2019	0.47	-2.3
2,086,438	+		Synpcc7942_2019	0.63	-1.2
2,086,517	-		Synpcc7942_2019	0.72	-0.9
2,086,527	+		Synpcc7942_2019	0.73	-2.0
2,086,585	-		Synpcc7942_2019	0.80	-1.6
2,086,590	-		Synpcc7942_2019	0.80	+0.5
2,086,594	+		Synpcc7942_2019	0.81	-2.7
2,086,697	-				-2.1
2,086,775	+				-0.3
2,086,783	-				+0.2
2,086,840	+				-0.6
2,086,842	+				-0.3
2,086,882	-				+0.5