Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1844

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,910,047	+		Synpcc7942_1842	0.87	+0.7
1,910,047	+		Synpcc7942_1842	0.87	+0.8
1,910,047	+		Synpcc7942_1842	0.87	-0.5
1,910,047	+		Synpcc7942_1842	0.87	+1.6
1,910,047	+		Synpcc7942_1842	0.87	-0.0
1,910,048	+		Synpcc7942_1842	0.87	+0.4
1,910,055	-		Synpcc7942_1842	0.87	+0.6
1,910,055	-		Synpcc7942_1842	0.87	-0.0
1,910,055	-		Synpcc7942_1842	0.87	+0.7
1,910,086	-		Synpcc7942_1842	0.90	+0.0
1,910,127	-				+0.4
1,910,129	+				+0.3
1,910,137	-				+1.3
1,910,148	-				-0.7
1,910,154	-				-0.2
1,910,164	-				-0.3
1,910,208	+				-0.0
1,910,223	-				+0.2
1,910,231	-				-0.8
1,910,233	+				+0.5
1,910,239	-				+1.1
1,910,248	+				+0.2
1,910,249	-				-0.6
1,910,263	+				-1.3
1,910,263	+				+0.3
1,910,270	+				-0.9
1,910,297	+				+0.1
1,910,312	+		Synpcc7942_1843	0.11	+0.4
1,910,338	+		Synpcc7942_1843	0.14	+0.6
1,910,396	-		Synpcc7942_1843	0.21	-0.9
1,910,409	-		Synpcc7942_1843	0.23	+0.6
1,910,438	+		Synpcc7942_1843	0.26	-0.6
1,910,459	+		Synpcc7942_1843	0.29	+0.0
1,910,459	+		Synpcc7942_1843	0.29	-0.0
1,910,467	-		Synpcc7942_1843	0.30	+1.2
1,910,467	-		Synpcc7942_1843	0.30	-0.3
1,910,467	-		Synpcc7942_1843	0.30	+0.1
1,910,467	-		Synpcc7942_1843	0.30	+0.5
1,910,525	-		Synpcc7942_1843	0.37	+0.4
1,910,592	+		Synpcc7942_1843	0.45	+0.6
1,910,594	+		Synpcc7942_1843	0.46	-1.3
1,910,594	+		Synpcc7942_1843	0.46	+1.9
1,910,594	+		Synpcc7942_1843	0.46	-0.1
1,910,594	+		Synpcc7942_1843	0.46	+0.7
1,910,594	+		Synpcc7942_1843	0.46	+0.6
1,910,594	+		Synpcc7942_1843	0.46	-0.2
1,910,594	+		Synpcc7942_1843	0.46	-0.6
1,910,594	+		Synpcc7942_1843	0.46	-0.4
1,910,602	-		Synpcc7942_1843	0.47	-2.5
1,910,602	-		Synpcc7942_1843	0.47	+0.2
1,910,602	-		Synpcc7942_1843	0.47	+0.9
1,910,602	-		Synpcc7942_1843	0.47	+0.4
1,910,602	-		Synpcc7942_1843	0.47	-0.4
1,910,602	-		Synpcc7942_1843	0.47	-0.6
1,910,629	+		Synpcc7942_1843	0.50	-0.8
1,910,637	-		Synpcc7942_1843	0.51	-1.3
1,910,637	-		Synpcc7942_1843	0.51	-0.5
1,910,637	-		Synpcc7942_1843	0.51	+0.3
1,910,639	+		Synpcc7942_1843	0.51	-0.4
1,910,664	+		Synpcc7942_1843	0.54	-0.4
1,910,664	+		Synpcc7942_1843	0.54	-0.1
1,910,672	-		Synpcc7942_1843	0.55	-0.6
1,910,672	-		Synpcc7942_1843	0.55	+0.0
1,910,672	-		Synpcc7942_1843	0.55	+0.2
1,910,672	-		Synpcc7942_1843	0.55	+0.4
1,910,672	-		Synpcc7942_1843	0.55	-0.3
1,910,672	-		Synpcc7942_1843	0.55	+0.1
1,910,705	+		Synpcc7942_1843	0.59	-1.1
1,910,713	-		Synpcc7942_1843	0.60	+0.3
1,910,713	-		Synpcc7942_1843	0.60	+0.3
1,910,842	-				+0.3
1,910,846	+		Synpcc7942_1843	0.77	-0.4
1,910,854	-		Synpcc7942_1843	0.78	-0.2
1,910,855	-		Synpcc7942_1843	0.78	+0.6
1,910,875	-		Synpcc7942_1843	0.80	+0.4
1,910,877	+		Synpcc7942_1843	0.80	-1.3
1,910,885	-		Synpcc7942_1843	0.81	-0.8
1,910,885	-		Synpcc7942_1843	0.81	+1.0
1,910,885	-		Synpcc7942_1843	0.81	-1.9
1,910,885	-		Synpcc7942_1843	0.81	+1.0
1,910,885	-		Synpcc7942_1843	0.81	+1.5
1,910,905	+		Synpcc7942_1843	0.84	+0.0
1,910,924	+		Synpcc7942_1843	0.86	+0.2
1,910,934	+		Synpcc7942_1843	0.88	-1.0
1,910,954	+				-0.8
1,910,958	-				+0.5
1,910,962	-				+0.7
1,910,969	+				-0.3
1,910,977	-				+1.6
1,910,977	-				-1.6
1,910,998	-				+0.3
1,911,005	+				+0.4
1,911,005	+				+0.1
1,911,013	-				-0.3
1,911,013	-				-0.1
1,911,015	-				+0.2
1,911,023	-				-0.5
1,911,482	+		Synpcc7942_1844	0.85	-0.9
1,911,534	-				-0.2
1,911,553	+				-0.0
1,911,553	+				-0.1
1,911,560	+				+1.3
1,911,561	-				-0.0
1,911,571	+				-0.3
1,911,579	-				-0.2
1,911,592	-				+1.8
1,911,724	-		Synpcc7942_1845	0.32	+0.8
1,911,743	+		Synpcc7942_1845	0.40	-0.1
1,911,743	+		Synpcc7942_1845	0.40	+0.5
1,911,746	-		Synpcc7942_1845	0.41	-2.0
1,911,750	+		Synpcc7942_1845	0.43	-1.6
1,911,750	+		Synpcc7942_1845	0.43	+0.7
1,911,751	-		Synpcc7942_1845	0.43	+0.2
1,911,751	-		Synpcc7942_1845	0.43	+0.6
1,911,769	+		Synpcc7942_1845	0.51	+1.3
1,911,777	+		Synpcc7942_1845	0.55	-0.0
1,911,777	-		Synpcc7942_1845	0.55	+0.6
1,911,777	-		Synpcc7942_1845	0.55	+0.1
1,911,777	-		Synpcc7942_1845	0.55	+0.1
1,911,784	+		Synpcc7942_1845	0.58	-0.1
1,911,795	+		Synpcc7942_1845	0.63	+0.7
1,911,795	+		Synpcc7942_1845	0.63	-1.8
1,911,829	-		Synpcc7942_1845	0.78	+0.1
1,911,841	-		Synpcc7942_1845	0.83	-0.6
1,911,867	+				-0.2
1,911,867	+				-1.5
1,911,867	+				-1.2
1,911,867	+				-0.2
1,911,875	-				-1.0
1,911,875	-				-0.5
1,911,875	-				+1.0
1,911,875	-				+0.3
1,911,875	-				-0.1
1,911,891	-				+0.5
1,911,891	-				+1.3
1,911,902	+				-0.6
1,911,902	+				-0.1
1,911,904	+				+0.5
1,911,910	-				+0.6
1,911,921	-				-0.0
1,911,921	-				-1.2
1,911,945	+				+0.8
1,911,954	-				-0.7
1,911,968	+				+0.1
1,911,968	+				-1.8
1,911,976	-				+1.2
1,911,976	-				-0.5
1,911,976	-				-0.4
1,911,976	-				+0.4
1,912,004	+				+1.4
1,912,012	-				+0.4
1,912,017	-				+1.3
1,912,060	-				+0.5
1,912,068	-				+0.6
1,912,089	-				-0.3