Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1758

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,824,210	+				-0.5
1,824,241	-				+0.7
1,824,293	-		Synpcc7942_1756	0.21	-0.9
1,824,293	-		Synpcc7942_1756	0.21	-1.5
1,824,314	-		Synpcc7942_1756	0.28	-0.6
1,824,316	+		Synpcc7942_1756	0.29	-2.0
1,824,319	-		Synpcc7942_1756	0.30	-2.6
1,824,344	+		Synpcc7942_1756	0.39	-2.5
1,824,344	+		Synpcc7942_1756	0.39	-1.3
1,824,454	-		Synpcc7942_1756	0.79	-4.3
1,824,459	-		Synpcc7942_1756	0.81	-1.4
1,824,467	-		Synpcc7942_1756	0.84	-1.3
1,824,504	-				+0.1
1,824,619	+				-3.1
1,824,719	-		Synpcc7942_1757	0.25	-3.9
1,824,812	+		Synpcc7942_1757	0.57	-1.6
1,824,814	+		Synpcc7942_1757	0.58	-2.3
1,824,885	+		Synpcc7942_1757	0.82	-1.6
1,824,893	-		Synpcc7942_1757	0.85	-1.7
1,824,893	-		Synpcc7942_1757	0.85	+0.5
1,824,924	+				-4.0
1,824,924	+				-1.6
1,824,945	+				-0.6
1,824,953	-				+1.0
1,824,953	-				-1.7
1,824,969	-				-2.4
1,824,995	-				-1.9
1,825,025	+				-1.8
1,825,025	+				-1.9
1,825,033	-				-1.6
1,825,033	-				-1.7
1,825,045	+				-1.2
1,825,075	+				-2.0
1,825,099	+				-1.6
1,825,182	-				-3.2
1,825,209	-				-1.8
1,825,215	-				-2.1
1,825,215	-				-2.9
1,825,221	-				-2.2
1,825,226	-				-2.4
1,825,226	-				-1.3
1,825,226	-				-2.9
1,825,249	+				-1.3
1,825,249	+				-2.2
1,825,250	+				-0.9
1,825,250	+				-1.3
1,825,250	+				-2.2
1,825,250	+				-2.5
1,825,250	+				-2.5
1,825,258	-				-2.5
1,825,258	-				-0.9
1,825,258	-				-2.9
1,825,258	-				-2.4
1,825,258	-				-0.8
1,825,279	-				-1.7
1,825,329	-		Synpcc7942_1758	0.14	-2.6
1,825,329	-		Synpcc7942_1758	0.14	-1.5
1,825,363	+		Synpcc7942_1758	0.17	+0.5
1,825,364	-		Synpcc7942_1758	0.17	-1.4
1,825,369	+		Synpcc7942_1758	0.17	-0.7
1,825,377	-		Synpcc7942_1758	0.18	-1.7
1,825,377	-		Synpcc7942_1758	0.18	-1.8
1,825,383	+		Synpcc7942_1758	0.19	-1.2
1,825,490	-		Synpcc7942_1758	0.28	-0.5
1,825,533	-		Synpcc7942_1758	0.32	-0.2
1,825,540	-		Synpcc7942_1758	0.33	-1.0
1,825,619	-		Synpcc7942_1758	0.40	-0.8
1,825,622	+				-1.6
1,825,681	+		Synpcc7942_1758	0.46	-4.3
1,825,691	+		Synpcc7942_1758	0.47	-4.1
1,825,691	+		Synpcc7942_1758	0.47	-1.2
1,825,699	-		Synpcc7942_1758	0.48	-1.5
1,825,746	-		Synpcc7942_1758	0.52	-0.5
1,825,761	+		Synpcc7942_1758	0.53	-1.1
1,825,764	-		Synpcc7942_1758	0.54	+1.0
1,825,778	+		Synpcc7942_1758	0.55	-1.8
1,825,814	-		Synpcc7942_1758	0.58	-2.1
1,825,816	+		Synpcc7942_1758	0.58	-1.8
1,825,816	+		Synpcc7942_1758	0.58	-1.9
1,825,816	+		Synpcc7942_1758	0.58	-1.2
1,825,816	+		Synpcc7942_1758	0.58	-0.5
1,825,852	-		Synpcc7942_1758	0.62	-2.0
1,825,875	-		Synpcc7942_1758	0.64	-0.7
1,825,908	-		Synpcc7942_1758	0.67	-0.9
1,825,913	-		Synpcc7942_1758	0.67	-0.0
1,825,913	-		Synpcc7942_1758	0.67	-0.9
1,825,946	+		Synpcc7942_1758	0.70	-0.7
1,825,954	-		Synpcc7942_1758	0.71	-1.3
1,825,961	+		Synpcc7942_1758	0.72	-1.2
1,826,013	+		Synpcc7942_1758	0.77	-1.6
1,826,021	-				-0.6
1,826,060	+		Synpcc7942_1758	0.81	-0.9
1,826,068	-		Synpcc7942_1758	0.82	-1.5
1,826,092	+		Synpcc7942_1758	0.84	-1.6
1,826,100	-		Synpcc7942_1758	0.85	-2.1
1,826,104	+		Synpcc7942_1758	0.85	-0.6
1,826,140	-		Synpcc7942_1758	0.88	-1.6
1,826,177	+				-1.0
1,826,182	+				-1.1
1,826,187	+				-3.1
1,826,195	-				-0.2
1,826,195	-				+1.2
1,826,206	+				-0.9
1,826,221	+				-0.0
1,826,221	+				+1.4
1,826,244	-				-1.6
1,826,246	+				-0.4
1,826,247	+				-0.7
1,826,251	+				-0.2
1,826,254	-				-3.6
1,826,254	-				-1.7
1,826,255	-				-0.5
1,826,276	+		Synpcc7942_1759	0.13	-2.0
1,826,367	-		Synpcc7942_1759	0.58	-1.8
1,826,398	+		Synpcc7942_1759	0.73	-0.5
1,826,401	-		Synpcc7942_1759	0.75	-0.8
1,826,404	-		Synpcc7942_1759	0.76	+0.8
1,826,406	-		Synpcc7942_1759	0.77	-2.4
1,826,406	-		Synpcc7942_1759	0.77	+0.2
1,826,446	+				+0.2
1,826,467	+				-1.3
1,826,507	-				-2.0
1,826,507	-				-1.0
1,826,541	-				-1.4
1,826,543	-				-0.4
1,826,576	+				+0.6
1,826,576	+				+1.6
1,826,576	+				+0.5
1,826,576	+				-1.7
1,826,584	-				-0.2
1,826,584	-				+0.3
1,826,594	+				+0.1
1,826,594	-				+0.2
1,826,599	+				-1.3
1,826,607	-				+0.0
1,826,609	+				-0.3
1,826,617	-				-0.1
1,826,631	-				-1.4
1,826,676	+	ald	Synpcc7942_1760	0.14	-0.9
1,826,688	+	ald	Synpcc7942_1760	0.15	-0.4
1,826,706	+	ald	Synpcc7942_1760	0.16	+0.1
1,826,711	+	ald	Synpcc7942_1760	0.17	-1.5
1,826,711	+	ald	Synpcc7942_1760	0.17	-1.7
1,826,730	+	ald	Synpcc7942_1760	0.18	-1.2
1,826,742	+	ald	Synpcc7942_1760	0.20	-2.8
1,826,742	+	ald	Synpcc7942_1760	0.20	-0.5
1,826,750	-	ald	Synpcc7942_1760	0.20	-0.9
1,826,755	+	ald	Synpcc7942_1760	0.21	-1.1
1,826,765	+	ald	Synpcc7942_1760	0.22	-0.7
1,826,765	+	ald	Synpcc7942_1760	0.22	-0.2
1,826,770	-	ald	Synpcc7942_1760	0.22	-2.2
1,826,786	+	ald	Synpcc7942_1760	0.24	-1.7
1,826,789	-	ald	Synpcc7942_1760	0.24	+0.5
1,826,794	+	ald	Synpcc7942_1760	0.24	-1.1
1,826,802	-	ald	Synpcc7942_1760	0.25	-1.0
1,826,804	+	ald	Synpcc7942_1760	0.25	-0.9
1,826,812	-	ald	Synpcc7942_1760	0.26	+0.1
1,826,827	+	ald	Synpcc7942_1760	0.27	-0.7
1,826,835	-	ald	Synpcc7942_1760	0.28	-0.8
1,826,843	+	ald	Synpcc7942_1760	0.29	-1.2
1,826,853	-	ald	Synpcc7942_1760	0.30	-0.6
1,826,900	+	ald	Synpcc7942_1760	0.34	-0.9
1,826,908	-	ald	Synpcc7942_1760	0.35	+0.6
1,827,018	+	ald	Synpcc7942_1760	0.45	+0.3
1,827,018	+	ald	Synpcc7942_1760	0.45	-0.0
1,827,041	+	ald	Synpcc7942_1760	0.47	-0.2
1,827,059	-	ald	Synpcc7942_1760	0.49	-0.0
1,827,063	+	ald	Synpcc7942_1760	0.49	-1.2
1,827,072	-	ald	Synpcc7942_1760	0.50	-2.6
1,827,125	-	ald	Synpcc7942_1760	0.55	-0.3
1,827,140	+	ald	Synpcc7942_1760	0.56	-0.1
1,827,142	+	ald	Synpcc7942_1760	0.56	-0.2
1,827,148	-	ald	Synpcc7942_1760	0.57	-0.5
1,827,162	-	ald	Synpcc7942_1760	0.58	-0.7
1,827,176	+	ald	Synpcc7942_1760	0.59	-1.7
1,827,176	+	ald	Synpcc7942_1760	0.59	-0.9
1,827,178	-	ald	Synpcc7942_1760	0.60	-1.3
1,827,184	-	ald	Synpcc7942_1760	0.60	-0.3
1,827,207	+	ald	Synpcc7942_1760	0.62	-1.0
1,827,207	+	ald	Synpcc7942_1760	0.62	-0.3
1,827,214	-	ald	Synpcc7942_1760	0.63	+0.3
1,827,217	+	ald	Synpcc7942_1760	0.63	-0.8
1,827,234	+	ald	Synpcc7942_1760	0.65	-0.9
1,827,237	-	ald	Synpcc7942_1760	0.65	-2.0
1,827,237	-	ald	Synpcc7942_1760	0.65	-0.2