Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1757

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,823,665	+		Synpcc7942_1755	0.68	+0.8
1,823,673	-		Synpcc7942_1755	0.68	+0.4
1,823,673	-		Synpcc7942_1755	0.68	-0.6
1,823,703	+		Synpcc7942_1755	0.70	+0.9
1,823,705	+		Synpcc7942_1755	0.70	-1.5
1,823,715	+		Synpcc7942_1755	0.70	+0.0
1,823,734	+		Synpcc7942_1755	0.72	-2.9
1,823,739	+		Synpcc7942_1755	0.72	-0.8
1,823,747	-		Synpcc7942_1755	0.72	+0.2
1,823,748	-		Synpcc7942_1755	0.72	-1.1
1,823,760	+		Synpcc7942_1755	0.73	+0.1
1,823,770	+		Synpcc7942_1755	0.74	-0.4
1,823,778	-		Synpcc7942_1755	0.74	-0.5
1,823,778	-		Synpcc7942_1755	0.74	-1.9
1,823,778	-		Synpcc7942_1755	0.74	-1.2
1,823,803	-		Synpcc7942_1755	0.75	-0.1
1,823,811	-		Synpcc7942_1755	0.76	-0.4
1,823,834	-		Synpcc7942_1755	0.77	-0.8
1,823,835	-		Synpcc7942_1755	0.77	-1.0
1,823,839	-		Synpcc7942_1755	0.78	+0.0
1,823,862	+		Synpcc7942_1755	0.79	-1.1
1,823,862	+		Synpcc7942_1755	0.79	-1.5
1,823,869	+		Synpcc7942_1755	0.79	+0.0
1,823,870	-		Synpcc7942_1755	0.79	-1.0
1,823,870	-		Synpcc7942_1755	0.79	-1.2
1,823,902	+		Synpcc7942_1755	0.81	-0.8
1,823,918	+		Synpcc7942_1755	0.82	-2.0
1,823,928	+		Synpcc7942_1755	0.83	-0.4
1,823,938	+		Synpcc7942_1755	0.83	-0.8
1,823,943	+		Synpcc7942_1755	0.84	-0.6
1,823,957	+		Synpcc7942_1755	0.84	-2.2
1,823,957	+		Synpcc7942_1755	0.84	-1.0
1,823,968	+		Synpcc7942_1755	0.85	-0.7
1,824,009	+		Synpcc7942_1755	0.87	-1.9
1,824,012	-		Synpcc7942_1755	0.88	+0.4
1,824,014	+		Synpcc7942_1755	0.88	-1.5
1,824,014	+		Synpcc7942_1755	0.88	-0.3
1,824,018	+		Synpcc7942_1755	0.88	-0.4
1,824,018	+		Synpcc7942_1755	0.88	+0.3
1,824,021	-		Synpcc7942_1755	0.88	-0.4
1,824,021	-		Synpcc7942_1755	0.88	+0.6
1,824,032	-				+0.4
1,824,041	+		Synpcc7942_1755	0.89	-3.4
1,824,049	-		Synpcc7942_1755	0.90	+0.5
1,824,070	+				-0.3
1,824,143	+				-1.3
1,824,153	-				-0.2
1,824,153	-				-2.2
1,824,210	+				-0.5
1,824,241	-				+0.7
1,824,293	-		Synpcc7942_1756	0.21	-0.9
1,824,293	-		Synpcc7942_1756	0.21	-1.5
1,824,314	-		Synpcc7942_1756	0.28	-0.6
1,824,316	+		Synpcc7942_1756	0.29	-2.0
1,824,319	-		Synpcc7942_1756	0.30	-2.6
1,824,344	+		Synpcc7942_1756	0.39	-2.5
1,824,344	+		Synpcc7942_1756	0.39	-1.3
1,824,454	-		Synpcc7942_1756	0.79	-4.3
1,824,459	-		Synpcc7942_1756	0.81	-1.4
1,824,467	-		Synpcc7942_1756	0.84	-1.3
1,824,504	-				+0.1
1,824,619	+				-3.1
1,824,719	-		Synpcc7942_1757	0.25	-3.9
1,824,812	+		Synpcc7942_1757	0.57	-1.6
1,824,814	+		Synpcc7942_1757	0.58	-2.3
1,824,885	+		Synpcc7942_1757	0.82	-1.6
1,824,893	-		Synpcc7942_1757	0.85	-1.7
1,824,893	-		Synpcc7942_1757	0.85	+0.5
1,824,924	+				-4.0
1,824,924	+				-1.6
1,824,945	+				-0.6
1,824,953	-				+1.0
1,824,953	-				-1.7
1,824,969	-				-2.4
1,824,995	-				-1.9
1,825,025	+				-1.8
1,825,025	+				-1.9
1,825,033	-				-1.6
1,825,033	-				-1.7
1,825,045	+				-1.2
1,825,075	+				-2.0
1,825,099	+				-1.6
1,825,182	-				-3.2
1,825,209	-				-1.8
1,825,215	-				-2.1
1,825,215	-				-2.9
1,825,221	-				-2.2
1,825,226	-				-2.4
1,825,226	-				-1.3
1,825,226	-				-2.9
1,825,249	+				-1.3
1,825,249	+				-2.2
1,825,250	+				-0.9
1,825,250	+				-1.3
1,825,250	+				-2.2
1,825,250	+				-2.5
1,825,250	+				-2.5
1,825,258	-				-2.5
1,825,258	-				-0.9
1,825,258	-				-2.9
1,825,258	-				-2.4
1,825,258	-				-0.8
1,825,279	-				-1.7
1,825,329	-		Synpcc7942_1758	0.14	-2.6
1,825,329	-		Synpcc7942_1758	0.14	-1.5
1,825,363	+		Synpcc7942_1758	0.17	+0.5
1,825,364	-		Synpcc7942_1758	0.17	-1.4
1,825,369	+		Synpcc7942_1758	0.17	-0.7
1,825,377	-		Synpcc7942_1758	0.18	-1.7
1,825,377	-		Synpcc7942_1758	0.18	-1.8
1,825,383	+		Synpcc7942_1758	0.19	-1.2
1,825,490	-		Synpcc7942_1758	0.28	-0.5
1,825,533	-		Synpcc7942_1758	0.32	-0.2
1,825,540	-		Synpcc7942_1758	0.33	-1.0
1,825,619	-		Synpcc7942_1758	0.40	-0.8
1,825,622	+				-1.6
1,825,681	+		Synpcc7942_1758	0.46	-4.3
1,825,691	+		Synpcc7942_1758	0.47	-4.1
1,825,691	+		Synpcc7942_1758	0.47	-1.2
1,825,699	-		Synpcc7942_1758	0.48	-1.5
1,825,746	-		Synpcc7942_1758	0.52	-0.5
1,825,761	+		Synpcc7942_1758	0.53	-1.1
1,825,764	-		Synpcc7942_1758	0.54	+1.0
1,825,778	+		Synpcc7942_1758	0.55	-1.8
1,825,814	-		Synpcc7942_1758	0.58	-2.1
1,825,816	+		Synpcc7942_1758	0.58	-1.8
1,825,816	+		Synpcc7942_1758	0.58	-1.9
1,825,816	+		Synpcc7942_1758	0.58	-1.2
1,825,816	+		Synpcc7942_1758	0.58	-0.5
1,825,852	-		Synpcc7942_1758	0.62	-2.0
1,825,875	-		Synpcc7942_1758	0.64	-0.7
1,825,908	-		Synpcc7942_1758	0.67	-0.9
1,825,913	-		Synpcc7942_1758	0.67	-0.0
1,825,913	-		Synpcc7942_1758	0.67	-0.9