Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1719

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,789,401	-	glcE	Synpcc7942_1718	0.29	-0.5
1,789,445	+	glcE	Synpcc7942_1718	0.33	-2.4
1,789,484	-	glcE	Synpcc7942_1718	0.36	-1.3
1,789,503	-	glcE	Synpcc7942_1718	0.37	-1.0
1,789,513	+	glcE	Synpcc7942_1718	0.38	+1.6
1,789,531	-	glcE	Synpcc7942_1718	0.39	-1.0
1,789,549	+	glcE	Synpcc7942_1718	0.41	+0.6
1,789,580	-	glcE	Synpcc7942_1718	0.43	-1.0
1,789,580	-	glcE	Synpcc7942_1718	0.43	+0.5
1,789,590	-	glcE	Synpcc7942_1718	0.44	+0.6
1,789,604	-				-0.6
1,789,677	+	glcE	Synpcc7942_1718	0.51	-1.6
1,789,685	-	glcE	Synpcc7942_1718	0.51	+1.0
1,789,685	-	glcE	Synpcc7942_1718	0.51	+0.9
1,789,687	+	glcE	Synpcc7942_1718	0.52	+0.9
1,789,728	-	glcE	Synpcc7942_1718	0.55	-0.8
1,789,740	+	glcE	Synpcc7942_1718	0.56	-0.6
1,789,740	+	glcE	Synpcc7942_1718	0.56	-0.2
1,789,785	+	glcE	Synpcc7942_1718	0.59	+0.6
1,789,797	+	glcE	Synpcc7942_1718	0.60	+0.1
1,789,797	+	glcE	Synpcc7942_1718	0.60	-0.5
1,789,798	+	glcE	Synpcc7942_1718	0.60	+0.8
1,789,798	-	glcE	Synpcc7942_1718	0.60	-0.6
1,789,805	-	glcE	Synpcc7942_1718	0.61	+0.3
1,789,886	-	glcE	Synpcc7942_1718	0.67	-0.3
1,789,914	+	glcE	Synpcc7942_1718	0.69	-1.6
1,789,924	+	glcE	Synpcc7942_1718	0.70	+0.4
1,789,936	+	glcE	Synpcc7942_1718	0.71	-0.3
1,789,936	+	glcE	Synpcc7942_1718	0.71	+0.9
1,789,944	-	glcE	Synpcc7942_1718	0.72	+0.1
1,789,944	-	glcE	Synpcc7942_1718	0.72	+1.0
1,789,948	+	glcE	Synpcc7942_1718	0.72	-1.1
1,789,949	+	glcE	Synpcc7942_1718	0.72	-0.7
1,789,992	-	glcE	Synpcc7942_1718	0.75	+3.3
1,790,000	+	glcE	Synpcc7942_1718	0.76	+1.0
1,790,063	+	glcE	Synpcc7942_1718	0.81	+0.4
1,790,069	-	glcE	Synpcc7942_1718	0.81	-2.0
1,790,069	-	glcE	Synpcc7942_1718	0.81	-0.3
1,790,086	-	glcE	Synpcc7942_1718	0.83	+0.2
1,790,102	+				-1.1
1,790,109	-	glcE	Synpcc7942_1718	0.85	-2.8
1,790,112	+	glcE	Synpcc7942_1718	0.85	+0.0
1,790,141	+	glcE	Synpcc7942_1718	0.87	+1.1
1,790,151	-	glcE	Synpcc7942_1718	0.88	+0.8
1,790,211	-				+1.2
1,790,222	+				+0.6
1,790,236	-				-1.2
1,790,245	-				+0.0
1,791,803	+				-0.0
1,791,836	+				+1.0
1,791,838	+				+0.6
1,791,844	-				-0.3
1,791,855	+				+1.3
1,791,856	-				-0.3
1,791,861	-				+0.8
1,791,905	+				+0.1
1,791,929	-				+0.8
1,791,934	+				-0.3
1,791,942	+				+0.0
1,791,942	+				+0.8
1,791,942	+				+0.1
1,791,952	-				-1.6
1,791,957	-				+1.2
1,791,977	+				-0.0
1,791,977	+				+1.8
1,792,050	+		Synpcc7942_1720	0.22	+1.0
1,792,058	-		Synpcc7942_1720	0.24	+0.6
1,792,058	-		Synpcc7942_1720	0.24	+0.3
1,792,071	+		Synpcc7942_1720	0.27	-0.1
1,792,071	+		Synpcc7942_1720	0.27	+0.8
1,792,079	-		Synpcc7942_1720	0.29	+1.4
1,792,079	-		Synpcc7942_1720	0.29	+1.2
1,792,079	-				+3.0
1,792,079	-		Synpcc7942_1720	0.29	-1.0
1,792,096	-		Synpcc7942_1720	0.33	+1.9
1,792,097	-		Synpcc7942_1720	0.33	+0.8
1,792,115	+		Synpcc7942_1720	0.37	+0.0
1,792,117	-		Synpcc7942_1720	0.37	+0.5
1,792,123	-		Synpcc7942_1720	0.39	-1.0
1,792,129	+				+1.5
1,792,150	+		Synpcc7942_1720	0.45	+0.8
1,792,195	-				+0.0
1,792,210	+		Synpcc7942_1720	0.59	+0.6
1,792,210	+		Synpcc7942_1720	0.59	+1.1
1,792,218	-				+0.2
1,792,218	-		Synpcc7942_1720	0.60	+0.5
1,792,218	-		Synpcc7942_1720	0.60	-0.1
1,792,220	-		Synpcc7942_1720	0.61	+0.6
1,792,307	+		Synpcc7942_1720	0.80	+1.1
1,792,309	-				+0.4
1,792,338	-		Synpcc7942_1720	0.88	-0.0
1,792,349	+				-0.1
1,792,359	+				+1.0
1,792,359	+				+1.6
1,792,359	+				+0.9
1,792,367	-				+1.0
1,792,367	-				+1.3
1,792,367	-				+1.0
1,792,367	-				+0.4
1,792,367	-				+1.5
1,792,395	-				+1.1
1,792,400	-				+0.6
1,792,430	-				+0.5
1,792,443	-				-0.4
1,792,450	-				-1.1
1,792,503	-				-0.7
1,792,551	-				+0.1
1,792,559	+				-3.4
1,792,560	-				-1.7
1,792,560	-				+0.8
1,792,561	+				-1.4
1,792,561	+				-0.2
1,792,564	+				+1.0
1,792,569	-				-0.5
1,792,569	-				-0.8
1,792,572	-				+0.1
1,792,572	-				-0.0
1,792,572	-				-0.7
1,792,626	+				-0.7
1,792,631	+				-0.7
1,792,767	-				+0.0
1,792,767	-				+0.0
1,792,768	-				+0.2