Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1620

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,684,955	-				-0.5
1,684,955	-				-0.6
1,684,976	+				-0.6
1,684,994	-		Synpcc7942_1618	0.13	-1.8
1,685,142	+		Synpcc7942_1618	0.42	-2.5
1,685,161	-		Synpcc7942_1618	0.46	-1.2
1,685,209	-		Synpcc7942_1618	0.56	+2.4
1,685,238	-		Synpcc7942_1618	0.61	-0.8
1,685,247	-		Synpcc7942_1618	0.63	+0.6
1,685,318	-		Synpcc7942_1618	0.77	-1.0
1,685,346	+		Synpcc7942_1618	0.83	+1.0
1,685,352	+		Synpcc7942_1618	0.84	+0.5
1,685,362	+		Synpcc7942_1618	0.86	-2.4
1,685,370	-		Synpcc7942_1618	0.87	+2.0
1,685,374	-		Synpcc7942_1618	0.88	+0.5
1,685,384	+				+0.3
1,685,404	+				+0.4
1,685,459	-				-0.2
1,685,485	-				+0.1
1,685,486	-				+0.4
1,685,487	+		Synpcc7942_1619	0.10	-2.1
1,685,503	+		Synpcc7942_1619	0.13	-0.9
1,685,529	-		Synpcc7942_1619	0.18	-1.1
1,685,545	+		Synpcc7942_1619	0.21	-1.7
1,685,547	-		Synpcc7942_1619	0.22	-0.1
1,685,555	+		Synpcc7942_1619	0.23	-0.2
1,685,577	+		Synpcc7942_1619	0.28	-2.5
1,685,585	-		Synpcc7942_1619	0.29	-1.3
1,685,592	-		Synpcc7942_1619	0.31	-1.9
1,685,625	-		Synpcc7942_1619	0.37	-1.9
1,685,682	+		Synpcc7942_1619	0.49	+0.0
1,685,695	-		Synpcc7942_1619	0.51	-1.1
1,685,708	-		Synpcc7942_1619	0.54	-0.9
1,685,740	+		Synpcc7942_1619	0.60	+0.3
1,685,745	+		Synpcc7942_1619	0.61	+0.0
1,685,770	+		Synpcc7942_1619	0.66	-1.3
1,685,801	+		Synpcc7942_1619	0.72	-0.5
1,685,802	-		Synpcc7942_1619	0.72	-0.6
1,685,804	+		Synpcc7942_1619	0.73	-0.3
1,685,806	+		Synpcc7942_1619	0.73	-0.3
1,685,806	+		Synpcc7942_1619	0.73	-1.3
1,685,809	-		Synpcc7942_1619	0.74	+0.0
1,685,812	-				+0.0
1,685,812	-		Synpcc7942_1619	0.74	-0.2
1,685,833	+		Synpcc7942_1619	0.78	+0.1
1,685,902	+				-1.8
1,685,957	+				-0.8
1,685,957	+				-0.6
1,685,965	-				-1.1
1,685,965	-				-1.3
1,685,968	+				-0.8
1,685,976	-				-0.1
1,685,980	+				-4.3
1,685,987	+				+0.6
1,685,988	-				-0.8
1,685,995	-				-1.1
1,686,009	-				-0.8
1,686,011	+				-0.9
1,686,056	-				-0.5
1,686,071	+				-2.7
1,686,079	-				-0.5
1,686,079	-				-0.5
1,686,104	+	ycf46	Synpcc7942_1620	0.11	-0.7
1,686,105	+	ycf46	Synpcc7942_1620	0.11	-1.0
1,686,123	+	ycf46	Synpcc7942_1620	0.12	+0.3
1,686,148	-	ycf46	Synpcc7942_1620	0.14	-1.2
1,686,156	-	ycf46	Synpcc7942_1620	0.14	-0.3
1,686,162	-	ycf46	Synpcc7942_1620	0.15	-0.8
1,686,191	-	ycf46	Synpcc7942_1620	0.17	-1.3
1,686,200	-	ycf46	Synpcc7942_1620	0.17	-1.5
1,686,250	+	ycf46	Synpcc7942_1620	0.21	-0.4
1,686,263	-	ycf46	Synpcc7942_1620	0.22	-0.9
1,686,276	-	ycf46	Synpcc7942_1620	0.22	-1.0
1,686,296	+	ycf46	Synpcc7942_1620	0.24	-0.7
1,686,335	-	ycf46	Synpcc7942_1620	0.26	-0.8
1,686,345	-	ycf46	Synpcc7942_1620	0.27	-2.6
1,686,345	-	ycf46	Synpcc7942_1620	0.27	-0.5
1,686,395	-	ycf46	Synpcc7942_1620	0.30	-0.8
1,686,404	+	ycf46	Synpcc7942_1620	0.31	-0.4
1,686,444	+	ycf46	Synpcc7942_1620	0.34	-0.2
1,686,449	+	ycf46	Synpcc7942_1620	0.34	-1.9
1,686,457	-	ycf46	Synpcc7942_1620	0.34	-2.9
1,686,457	-	ycf46	Synpcc7942_1620	0.34	-0.2
1,686,457	-	ycf46	Synpcc7942_1620	0.34	-0.7
1,686,470	-	ycf46	Synpcc7942_1620	0.35	+0.2
1,686,470	-	ycf46	Synpcc7942_1620	0.35	-0.4
1,686,526	+	ycf46	Synpcc7942_1620	0.39	-0.7
1,686,646	+	ycf46	Synpcc7942_1620	0.47	-0.5
1,686,646	+	ycf46	Synpcc7942_1620	0.47	-0.3
1,686,682	+	ycf46	Synpcc7942_1620	0.49	-0.5
1,686,690	-	ycf46	Synpcc7942_1620	0.50	+1.5
1,686,712	-	ycf46	Synpcc7942_1620	0.51	-1.0
1,686,723	+	ycf46	Synpcc7942_1620	0.52	-1.9
1,686,738	+	ycf46	Synpcc7942_1620	0.53	-1.0
1,686,757	+	ycf46	Synpcc7942_1620	0.54	-0.3
1,686,765	+	ycf46	Synpcc7942_1620	0.55	-2.4
1,686,784	+	ycf46	Synpcc7942_1620	0.56	-1.1
1,686,786	+	ycf46	Synpcc7942_1620	0.56	+0.1
1,686,792	-	ycf46	Synpcc7942_1620	0.57	-1.3
1,686,837	+	ycf46	Synpcc7942_1620	0.60	-0.7
1,686,854	-	ycf46	Synpcc7942_1620	0.61	-1.2
1,686,939	+	ycf46	Synpcc7942_1620	0.66	+0.0
1,686,989	+	ycf46	Synpcc7942_1620	0.70	-0.4
1,686,989	+	ycf46	Synpcc7942_1620	0.70	-0.4
1,686,997	-	ycf46	Synpcc7942_1620	0.70	+0.0
1,687,067	+	ycf46	Synpcc7942_1620	0.75	-0.5
1,687,075	-	ycf46	Synpcc7942_1620	0.75	-2.6
1,687,193	-	ycf46	Synpcc7942_1620	0.83	-1.1
1,687,247	+	ycf46	Synpcc7942_1620	0.87	-1.7
1,687,248	+	ycf46	Synpcc7942_1620	0.87	-1.5
1,687,252	+	ycf46	Synpcc7942_1620	0.87	+0.6
1,687,267	+	ycf46	Synpcc7942_1620	0.88	+0.8
1,687,267	+	ycf46	Synpcc7942_1620	0.88	-0.6
1,687,274	-	ycf46	Synpcc7942_1620	0.89	-1.3
1,687,275	-	ycf46	Synpcc7942_1620	0.89	-1.5
1,687,275	-	ycf46	Synpcc7942_1620	0.89	-0.5
1,687,299	-				-1.7
1,687,343	-				-0.3
1,687,385	+				-1.1
1,687,385	+				-0.7
1,687,391	+				-0.4
1,687,393	-				-2.0
1,687,446	-				+0.0
1,687,461	-				-0.4
1,687,463	+				+0.2
1,687,473	+				+0.3
1,687,473	+				+1.3
1,687,481	-				-1.0
1,687,481	-				+0.6
1,687,509	+				-0.4
1,687,543	+				-0.1
1,687,543	+				+0.0
1,687,543	+				-1.3
1,687,551	-				+0.6
1,687,551	-				+1.2
1,687,584	-				-0.6