Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1533

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,591,284	+	modA	Synpcc7942_1531	0.59	+1.0
1,591,373	-	modA	Synpcc7942_1531	0.70	-0.2
1,591,462	+	modA	Synpcc7942_1531	0.81	+1.4
1,591,559	-				+1.0
1,591,628	-				+0.8
1,591,628	-				+2.0
1,592,051	+		Synpcc7942_1532	0.66	-1.8
1,592,230	-				-0.2
1,592,249	+				+0.6
1,592,249	+				+0.8
1,592,271	+				+0.0
1,592,314	-				-0.6
1,592,327	+				+1.9
1,592,327	+				+1.7
1,592,335	-				-0.4
1,592,342	-	sdhB	Synpcc7942_1533	0.10	-1.6
1,592,390	+	sdhB	Synpcc7942_1533	0.16	+2.3
1,592,396	-	sdhB	Synpcc7942_1533	0.17	+2.1
1,592,398	-	sdhB	Synpcc7942_1533	0.17	+1.7
1,592,400	+	sdhB	Synpcc7942_1533	0.17	+2.0
1,592,400	+	sdhB	Synpcc7942_1533	0.17	+2.1
1,592,408	+	sdhB	Synpcc7942_1533	0.18	-0.1
1,592,408	-	sdhB	Synpcc7942_1533	0.18	+2.3
1,592,419	+	sdhB	Synpcc7942_1533	0.20	+2.9
1,592,445	+	sdhB	Synpcc7942_1533	0.23	+1.6
1,592,451	-	sdhB	Synpcc7942_1533	0.23	+2.0
1,592,460	-	sdhB	Synpcc7942_1533	0.25	+2.5
1,592,485	-	sdhB	Synpcc7942_1533	0.28	+2.2
1,592,489	+	sdhB	Synpcc7942_1533	0.28	+1.9
1,592,497	-	sdhB	Synpcc7942_1533	0.29	+2.2
1,592,551	-	sdhB	Synpcc7942_1533	0.35	+2.0
1,592,560	+	sdhB	Synpcc7942_1533	0.36	+1.1
1,592,596	+	sdhB	Synpcc7942_1533	0.41	+1.3
1,592,602	+	sdhB	Synpcc7942_1533	0.41	+2.4
1,592,647	-	sdhB	Synpcc7942_1533	0.47	+2.1
1,592,664	-	sdhB	Synpcc7942_1533	0.49	+3.0
1,592,664	-	sdhB	Synpcc7942_1533	0.49	+1.5
1,592,674	+	sdhB	Synpcc7942_1533	0.50	+3.0
1,592,674	+				+2.1
1,592,681	-	sdhB	Synpcc7942_1533	0.51	+1.6
1,592,682	-	sdhB	Synpcc7942_1533	0.51	+2.7
1,592,721	+	sdhB	Synpcc7942_1533	0.56	+2.3
1,592,728	+	sdhB	Synpcc7942_1533	0.56	+2.2
1,592,733	-	sdhB	Synpcc7942_1533	0.57	+3.5
1,592,733	-	sdhB	Synpcc7942_1533	0.57	+2.4
1,592,795	-	sdhB	Synpcc7942_1533	0.64	+2.8
1,592,848	-	sdhB	Synpcc7942_1533	0.71	+2.2
1,592,950	-	sdhB	Synpcc7942_1533	0.83	+2.6
1,592,961	+	sdhB	Synpcc7942_1533	0.84	+2.7
1,592,982	-	sdhB	Synpcc7942_1533	0.87	+2.6
1,592,982	-	sdhB	Synpcc7942_1533	0.87	+2.0
1,593,037	+				-2.0
1,593,042	+				+2.6
1,593,055	-				+0.7
1,593,096	-				-0.5
1,593,123	+				-1.0
1,593,123	+				+0.1
1,593,140	+				-1.5
1,593,171	+				-0.4
1,593,171	+				+0.5
1,593,179	-				+1.0
1,593,179	-				+0.4
1,593,179	-				-2.5
1,593,179	-				-1.7
1,593,179	-				-0.2
1,593,179	-				+0.0
1,593,189	-				-0.2
1,593,189	-				-2.3
1,593,218	+				+0.0
1,593,459	+		Synpcc7942_1534	0.11	+0.6
1,593,514	+		Synpcc7942_1534	0.14	+1.6
1,593,576	+		Synpcc7942_1534	0.16	+0.4
1,593,628	+		Synpcc7942_1534	0.19	-1.2
1,593,655	+		Synpcc7942_1534	0.20	-0.9
1,593,742	+		Synpcc7942_1534	0.24	-1.4
1,593,742	+		Synpcc7942_1534	0.24	+0.3
1,593,750	-		Synpcc7942_1534	0.24	+0.4
1,593,809	-		Synpcc7942_1534	0.27	-0.1
1,593,824	+		Synpcc7942_1534	0.28	+0.5
1,593,861	+		Synpcc7942_1534	0.29	+1.2
1,594,088	+		Synpcc7942_1534	0.40	+0.2
1,594,088	+		Synpcc7942_1534	0.40	-0.2