Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1495

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,545,131	+	mazG	Synpcc7942_1493	0.73	-0.5
1,545,139	-	mazG	Synpcc7942_1493	0.74	-0.5
1,545,139	-	mazG	Synpcc7942_1493	0.74	-0.2
1,545,143	+	mazG	Synpcc7942_1493	0.75	-0.4
1,545,144	-	mazG	Synpcc7942_1493	0.75	+1.4
1,545,167	+	mazG	Synpcc7942_1493	0.78	+1.1
1,545,175	-	mazG	Synpcc7942_1493	0.79	+0.1
1,545,203	-	mazG	Synpcc7942_1493	0.82	+0.2
1,545,207	+	mazG	Synpcc7942_1493	0.82	+0.5
1,545,207	+	mazG	Synpcc7942_1493	0.82	-1.3
1,545,209	-	mazG	Synpcc7942_1493	0.83	+0.4
1,545,210	+	mazG	Synpcc7942_1493	0.83	+0.9
1,545,215	-	mazG	Synpcc7942_1493	0.83	-3.3
1,545,223	-	mazG	Synpcc7942_1493	0.84	-0.3
1,545,270	-				+0.3
1,545,272	+				+0.6
1,545,282	+				+0.6
1,545,290	-				+0.6
1,545,331	+				+1.8
1,545,336	+				+0.4
1,545,348	+				+0.4
1,545,348	+				+1.1
1,545,348	+				-2.5
1,545,367	-				+0.2
1,545,380	+				+0.3
1,545,380	+				-1.4
1,545,395	-				-0.0
1,545,405	-				-1.0
1,545,565	-		Synpcc7942_1494	0.26	-1.5
1,546,101	+				+0.9
1,546,109	-				+0.3
1,546,109	-				+2.6
1,546,111	-				-0.3
1,546,111	-				-0.8
1,546,114	+				-0.9
1,546,119	+				-0.2
1,546,120	+				-1.8
1,546,127	-				-0.0
1,546,160	+				-0.7
1,546,168	-				-0.0
1,546,173	+				-0.2
1,546,173	+				-0.2
1,546,210	-		Synpcc7942_1495	0.16	-2.9
1,546,237	-		Synpcc7942_1495	0.22	-2.2
1,546,251	-		Synpcc7942_1495	0.24	-2.3
1,546,260	-		Synpcc7942_1495	0.26	-1.1
1,546,312	-		Synpcc7942_1495	0.36	-0.2
1,546,323	+		Synpcc7942_1495	0.38	-1.5
1,546,326	-		Synpcc7942_1495	0.38	-0.6
1,546,331	-		Synpcc7942_1495	0.39	-0.3
1,546,338	-		Synpcc7942_1495	0.41	-0.1
1,546,378	+		Synpcc7942_1495	0.48	-0.5
1,546,379	+		Synpcc7942_1495	0.48	-1.0
1,546,379	+		Synpcc7942_1495	0.48	-1.9
1,546,379	+		Synpcc7942_1495	0.48	+0.6
1,546,382	-		Synpcc7942_1495	0.49	+0.1
1,546,387	-		Synpcc7942_1495	0.50	-0.1
1,546,387	-		Synpcc7942_1495	0.50	-0.0
1,546,400	-		Synpcc7942_1495	0.52	-0.3
1,546,404	+		Synpcc7942_1495	0.53	-0.3
1,546,427	-		Synpcc7942_1495	0.58	-0.1
1,546,434	+		Synpcc7942_1495	0.59	-2.0
1,546,448	+		Synpcc7942_1495	0.62	-0.5
1,546,457	+		Synpcc7942_1495	0.63	-0.3
1,546,457	+		Synpcc7942_1495	0.63	-1.7
1,546,458	+		Synpcc7942_1495	0.63	-0.9
1,546,465	-		Synpcc7942_1495	0.65	+0.4
1,546,506	+		Synpcc7942_1495	0.73	+0.1
1,546,514	-		Synpcc7942_1495	0.74	-3.9
1,546,514	-		Synpcc7942_1495	0.74	+0.0
1,546,528	-		Synpcc7942_1495	0.77	-1.2
1,546,545	-		Synpcc7942_1495	0.80	-0.3
1,546,566	-		Synpcc7942_1495	0.84	+0.7
1,546,569	+		Synpcc7942_1495	0.84	-1.8
1,546,623	-				-1.2
1,546,623	-				+0.4
1,546,623	-				+0.1
1,546,623	-				+0.1
1,546,654	-				-0.7
1,547,600	+				+1.6