Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1485

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,536,382	-				+0.1
1,536,387	-				+0.4
1,536,405	+				+1.0
1,536,405	+				+0.6
1,536,413	-				+0.2
1,536,448	+		Synpcc7942_1485	0.15	-1.0
1,536,474	-		Synpcc7942_1485	0.25	-0.9
1,536,556	-		Synpcc7942_1485	0.56	-1.0
1,536,561	-		Synpcc7942_1485	0.58	-1.3
1,536,623	-		Synpcc7942_1485	0.81	-0.1
1,536,625	+		Synpcc7942_1485	0.82	-0.3
1,536,638	-		Synpcc7942_1485	0.87	-0.8
1,536,656	+				-0.3
1,536,659	-				-0.6
1,536,664	-				-0.8
1,536,670	-				-0.6
1,536,689	+		Synpcc7942_1486	0.10	-0.3
1,536,714	+		Synpcc7942_1486	0.20	+0.6
1,536,737	+		Synpcc7942_1486	0.29	-0.1
1,536,753	-				-2.2
1,536,770	-		Synpcc7942_1486	0.43	-1.0
1,536,783	-		Synpcc7942_1486	0.48	-0.4
1,536,801	-		Synpcc7942_1486	0.55	-1.1
1,536,804	+		Synpcc7942_1486	0.56	+0.2
1,536,804	+		Synpcc7942_1486	0.56	+0.4
1,536,804	+		Synpcc7942_1486	0.56	+0.2
1,536,804	+		Synpcc7942_1486	0.56	-0.0
1,536,804	+		Synpcc7942_1486	0.56	-0.5
1,536,804	+		Synpcc7942_1486	0.56	-0.0
1,536,804	+		Synpcc7942_1486	0.56	-1.6
1,536,804	+		Synpcc7942_1486	0.56	-0.4
1,536,812	-		Synpcc7942_1486	0.59	+0.1
1,536,812	-		Synpcc7942_1486	0.59	+0.3
1,536,812	-		Synpcc7942_1486	0.59	-1.8
1,536,812	-		Synpcc7942_1486	0.59	-2.9
1,536,816	+		Synpcc7942_1486	0.61	+0.6
1,536,826	+		Synpcc7942_1486	0.65	-0.7
1,536,826	+		Synpcc7942_1486	0.65	-1.7
1,536,838	-		Synpcc7942_1486	0.70	-2.0
1,536,891	+				+0.3
1,537,615	-				-0.3
1,537,615	-				-1.7
1,537,637	+				+0.0
1,537,646	-				+1.3
1,537,648	+				-0.5