Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1476

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,526,737	+	sbtA	Synpcc7942_1475	0.81	+2.9
1,527,134	+				+0.3
1,527,383	-				+0.8
1,527,383	-				-1.7
1,527,395	+				-0.5
1,527,428	-				-0.7
1,527,438	-				-2.2
1,527,438	-				-1.6
1,527,438	-				-0.8
1,527,438	-				-2.1
1,527,463	+				-0.8
1,527,528	-				-0.7
1,527,534	+				+0.8
1,527,592	+				-1.9
1,527,610	+				+0.2
1,527,626	+				+2.7
1,527,746	-				-3.7
1,527,806	+		Synpcc7942_1476	0.28	-3.9
1,527,807	+		Synpcc7942_1476	0.29	-3.2
1,527,814	-		Synpcc7942_1476	0.31	-1.9
1,527,814	-		Synpcc7942_1476	0.31	-3.8
1,527,826	-		Synpcc7942_1476	0.35	-2.3
1,527,849	-		Synpcc7942_1476	0.42	-2.7
1,527,856	+		Synpcc7942_1476	0.44	-0.9
1,527,856	+		Synpcc7942_1476	0.44	-3.3
1,527,881	+		Synpcc7942_1476	0.52	-1.0
1,527,992	-		Synpcc7942_1476	0.87	-0.0
1,527,999	+		Synpcc7942_1476	0.90	-0.9
1,528,016	-				-3.2
1,528,046	+				-2.6
1,528,054	-				-1.8
1,528,054	-				-0.5
1,528,061	-				-2.7
1,528,083	-				-1.6
1,528,112	-				-1.6
1,528,114	+				-1.0
1,528,117	-				-2.0
1,528,122	-				-1.6
1,528,141	-				-0.6
1,528,146	-				-2.3
1,528,193	+				-0.6
1,528,201	-				-1.6
1,528,201	-				-0.2
1,528,253	+				+0.4
1,528,261	-				-1.0
1,528,312	+				+0.5
1,528,325	-				-0.6
1,528,331	+				-0.1
1,528,399	+		Synpcc7942_1477	0.12	-0.2
1,528,400	+		Synpcc7942_1477	0.12	-1.3
1,528,407	-		Synpcc7942_1477	0.12	-0.2
1,528,425	+		Synpcc7942_1477	0.13	-1.7
1,528,433	-		Synpcc7942_1477	0.13	-1.8
1,528,497	-		Synpcc7942_1477	0.16	-0.7
1,528,502	-		Synpcc7942_1477	0.16	+0.8
1,528,532	-		Synpcc7942_1477	0.18	-1.7
1,528,581	+		Synpcc7942_1477	0.20	+0.2
1,528,599	-		Synpcc7942_1477	0.21	+0.5
1,528,621	+		Synpcc7942_1477	0.22	+0.3
1,528,627	-		Synpcc7942_1477	0.22	+0.0
1,528,629	-		Synpcc7942_1477	0.22	-0.5
1,528,629	-		Synpcc7942_1477	0.22	-1.5
1,528,629	-		Synpcc7942_1477	0.22	-1.5
1,528,631	+		Synpcc7942_1477	0.22	+0.2
1,528,639	-		Synpcc7942_1477	0.23	+0.4
1,528,641	-		Synpcc7942_1477	0.23	+1.0
1,528,659	-		Synpcc7942_1477	0.24	-0.0
1,528,740	+		Synpcc7942_1477	0.27	+0.0
1,528,742	+		Synpcc7942_1477	0.27	+0.1
1,528,748	-		Synpcc7942_1477	0.28	+0.6
1,528,748	-		Synpcc7942_1477	0.28	-1.6
1,528,751	+		Synpcc7942_1477	0.28	-0.5
1,528,759	-		Synpcc7942_1477	0.28	+0.7
1,528,759	-		Synpcc7942_1477	0.28	-1.0
1,528,761	-		Synpcc7942_1477	0.28	-0.3
1,528,771	-		Synpcc7942_1477	0.29	+0.2
1,528,791	-		Synpcc7942_1477	0.30	+0.5
1,528,810	+		Synpcc7942_1477	0.30	-2.2
1,528,826	+		Synpcc7942_1477	0.31	-1.8
1,528,859	-		Synpcc7942_1477	0.33	-0.3
1,528,909	+		Synpcc7942_1477	0.35	-0.3
1,528,943	-		Synpcc7942_1477	0.36	-0.0
1,528,944	-		Synpcc7942_1477	0.37	+0.3
1,528,944	-		Synpcc7942_1477	0.37	+0.3
1,528,947	+		Synpcc7942_1477	0.37	+0.3
1,528,954	+		Synpcc7942_1477	0.37	+0.2
1,528,955	-		Synpcc7942_1477	0.37	+0.2
1,528,955	-		Synpcc7942_1477	0.37	-0.2
1,528,959	+		Synpcc7942_1477	0.37	-0.6
1,528,975	+		Synpcc7942_1477	0.38	-1.0
1,528,979	+		Synpcc7942_1477	0.38	+0.7
1,529,004	-		Synpcc7942_1477	0.39	+0.2
1,529,018	+		Synpcc7942_1477	0.40	+1.6