Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1431

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,483,570	-		Synpcc7942_1430	0.27	+0.6
1,483,571	-		Synpcc7942_1430	0.27	+0.3
1,483,571	-		Synpcc7942_1430	0.27	-1.1
1,483,571	-		Synpcc7942_1430	0.27	-0.8
1,483,585	+		Synpcc7942_1430	0.29	-0.9
1,483,612	-		Synpcc7942_1430	0.32	-0.4
1,483,628	-		Synpcc7942_1430	0.33	+0.6
1,483,635	+		Synpcc7942_1430	0.34	+0.1
1,483,643	-		Synpcc7942_1430	0.35	-1.2
1,483,660	+		Synpcc7942_1430	0.37	+0.9
1,483,668	-		Synpcc7942_1430	0.38	-0.6
1,483,668	-		Synpcc7942_1430	0.38	+0.7
1,483,668	-		Synpcc7942_1430	0.38	+1.0
1,483,668	-		Synpcc7942_1430	0.38	+0.2
1,483,668	-		Synpcc7942_1430	0.38	+0.7
1,483,674	-		Synpcc7942_1430	0.38	+0.5
1,483,693	-		Synpcc7942_1430	0.40	+0.5
1,483,798	+		Synpcc7942_1430	0.51	-0.2
1,483,798	+		Synpcc7942_1430	0.51	+0.9
1,483,806	-		Synpcc7942_1430	0.52	+0.8
1,483,806	-		Synpcc7942_1430	0.52	+1.0
1,483,830	+		Synpcc7942_1430	0.55	+0.4
1,483,857	+		Synpcc7942_1430	0.58	-0.5
1,483,943	+		Synpcc7942_1430	0.67	-1.6
1,483,991	+		Synpcc7942_1430	0.72	+0.2
1,483,991	+		Synpcc7942_1430	0.72	+0.3
1,483,992	+		Synpcc7942_1430	0.72	-2.0
1,483,992	+		Synpcc7942_1430	0.72	-0.3
1,483,992	+		Synpcc7942_1430	0.72	-0.8
1,483,999	-		Synpcc7942_1430	0.73	-1.4
1,484,027	+		Synpcc7942_1430	0.76	+2.4
1,484,035	-		Synpcc7942_1430	0.77	-0.5
1,484,035	-		Synpcc7942_1430	0.77	+0.1
1,484,046	+		Synpcc7942_1430	0.78	+0.3
1,484,072	+		Synpcc7942_1430	0.81	+0.2
1,484,143	-		Synpcc7942_1430	0.88	+0.8
1,484,185	+				+1.0
1,484,193	-				-1.5
1,484,240	+				-0.8
1,484,346	+				+0.3
1,484,463	-				+0.3
1,484,509	-				+3.5
1,484,536	-				-0.7
1,484,536	-				-1.0
1,484,614	+	rotA	Synpcc7942_1431	0.15	-1.1
1,484,625	-	rotA	Synpcc7942_1431	0.17	-1.1
1,484,696	-	rotA	Synpcc7942_1431	0.34	-0.8
1,484,737	-	rotA	Synpcc7942_1431	0.43	-2.9
1,484,748	+	rotA	Synpcc7942_1431	0.45	-1.0
1,484,756	-	rotA	Synpcc7942_1431	0.47	-1.7
1,484,777	-	rotA	Synpcc7942_1431	0.52	-1.6
1,484,803	+	rotA	Synpcc7942_1431	0.58	-1.1
1,484,818	+	rotA	Synpcc7942_1431	0.61	-0.6
1,484,886	+	rotA	Synpcc7942_1431	0.77	-2.2
1,484,887	-	rotA	Synpcc7942_1431	0.77	-0.3
1,484,894	-	rotA	Synpcc7942_1431	0.79	-0.8
1,484,894	-	rotA	Synpcc7942_1431	0.79	-3.1
1,484,911	-	rotA	Synpcc7942_1431	0.83	-1.2
1,484,914	+	rotA	Synpcc7942_1431	0.83	-2.6
1,484,922	-	rotA	Synpcc7942_1431	0.85	-0.3
1,484,922	-	rotA	Synpcc7942_1431	0.85	-1.1
1,484,986	+				-1.3
1,485,024	-				+2.3
1,485,024	-				-0.1