Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1394

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,442,548	+				+0.0
1,442,555	+				-1.6
1,442,556	-				+1.6
1,442,595	+				-0.7
1,442,605	-		Synpcc7942_1393	0.11	-0.6
1,442,620	-		Synpcc7942_1393	0.13	+0.1
1,442,630	+		Synpcc7942_1393	0.14	-0.6
1,442,630	+		Synpcc7942_1393	0.14	-0.5
1,442,630	-		Synpcc7942_1393	0.14	+0.1
1,442,630	-		Synpcc7942_1393	0.14	-0.6
1,442,630	-		Synpcc7942_1393	0.14	-0.4
1,442,639	-		Synpcc7942_1393	0.15	-0.8
1,442,662	-		Synpcc7942_1393	0.17	-0.0
1,442,662	-		Synpcc7942_1393	0.17	+0.9
1,442,662	-		Synpcc7942_1393	0.17	+0.6
1,442,664	+		Synpcc7942_1393	0.17	-0.1
1,442,670	+		Synpcc7942_1393	0.18	+0.2
1,442,675	+		Synpcc7942_1393	0.19	+0.4
1,442,682	+		Synpcc7942_1393	0.19	-1.2
1,442,683	-		Synpcc7942_1393	0.20	+0.1
1,442,698	+		Synpcc7942_1393	0.21	-0.3
1,442,698	+		Synpcc7942_1393	0.21	-1.9
1,442,700	-		Synpcc7942_1393	0.21	+1.0
1,442,706	-		Synpcc7942_1393	0.22	-0.3
1,442,749	+		Synpcc7942_1393	0.27	-0.8
1,442,749	+		Synpcc7942_1393	0.27	-0.4
1,442,749	+		Synpcc7942_1393	0.27	+0.1
1,442,757	+		Synpcc7942_1393	0.28	+1.0
1,442,757	-		Synpcc7942_1393	0.28	+1.1
1,442,757	-		Synpcc7942_1393	0.28	+0.1
1,442,757	-		Synpcc7942_1393	0.28	+0.0
1,442,757	-		Synpcc7942_1393	0.28	+0.9
1,442,757	-		Synpcc7942_1393	0.28	+0.7
1,442,757	-		Synpcc7942_1393	0.28	+0.8
1,442,765	-		Synpcc7942_1393	0.29	-0.9
1,442,766	+		Synpcc7942_1393	0.29	+1.2
1,442,767	+		Synpcc7942_1393	0.29	+0.1
1,442,776	+		Synpcc7942_1393	0.30	+1.4
1,442,789	-		Synpcc7942_1393	0.31	-0.7
1,442,822	-		Synpcc7942_1393	0.35	-1.5
1,442,856	+		Synpcc7942_1393	0.38	+0.6
1,442,866	+		Synpcc7942_1393	0.40	+0.0
1,442,866	+		Synpcc7942_1393	0.40	+2.1
1,442,891	-		Synpcc7942_1393	0.42	-2.0
1,442,899	+		Synpcc7942_1393	0.43	-0.6
1,442,908	-		Synpcc7942_1393	0.44	+0.0
1,442,908	-		Synpcc7942_1393	0.44	-0.0
1,442,925	+		Synpcc7942_1393	0.46	-0.6
1,442,925	+		Synpcc7942_1393	0.46	+0.4
1,442,925	+		Synpcc7942_1393	0.46	+0.3
1,442,998	+		Synpcc7942_1393	0.54	+0.7
1,443,026	+		Synpcc7942_1393	0.57	+0.5
1,443,026	+		Synpcc7942_1393	0.57	-2.2
1,443,026	+		Synpcc7942_1393	0.57	-1.5
1,443,034	-		Synpcc7942_1393	0.58	-0.4
1,443,034	-		Synpcc7942_1393	0.58	-0.3
1,443,036	+		Synpcc7942_1393	0.58	+1.3
1,443,044	-		Synpcc7942_1393	0.59	+0.3
1,443,044	-		Synpcc7942_1393	0.59	+0.8
1,443,044	-		Synpcc7942_1393	0.59	-0.9
1,443,051	-		Synpcc7942_1393	0.60	-0.6
1,443,100	+		Synpcc7942_1393	0.65	+0.1
1,443,106	+		Synpcc7942_1393	0.66	+0.6
1,443,123	-		Synpcc7942_1393	0.68	-0.6
1,443,140	+		Synpcc7942_1393	0.70	-1.1
1,443,140	+		Synpcc7942_1393	0.70	+0.2
1,443,148	-		Synpcc7942_1393	0.70	+0.1
1,443,165	+		Synpcc7942_1393	0.72	+1.1
1,443,173	-		Synpcc7942_1393	0.73	-0.4
1,443,174	+		Synpcc7942_1393	0.73	+0.2
1,443,188	+		Synpcc7942_1393	0.75	+0.5
1,443,201	+		Synpcc7942_1393	0.76	+0.7
1,443,204	-		Synpcc7942_1393	0.77	-1.6
1,443,234	+		Synpcc7942_1393	0.80	+0.1
1,443,252	-		Synpcc7942_1393	0.82	+0.1
1,443,252	-		Synpcc7942_1393	0.82	+1.0
1,443,252	-		Synpcc7942_1393	0.82	+0.0
1,443,252	-		Synpcc7942_1393	0.82	+1.2
1,443,277	-		Synpcc7942_1393	0.84	+0.1
1,443,288	+		Synpcc7942_1393	0.86	+0.2
1,443,296	+		Synpcc7942_1393	0.87	+0.1
1,443,299	-		Synpcc7942_1393	0.87	+0.7
1,443,310	-		Synpcc7942_1393	0.88	-0.0
1,443,320	+		Synpcc7942_1393	0.89	+0.0
1,443,320	+		Synpcc7942_1393	0.89	+0.1
1,443,320	+		Synpcc7942_1393	0.89	-0.0
1,443,328	-				-0.0
1,443,346	+				-0.2
1,443,346	+				-1.7
1,443,354	-				+0.6
1,443,358	+				-0.6
1,443,405	+				-0.5
1,443,448	+				-0.2
1,443,469	-				-1.0
1,443,488	-				+0.6
1,443,493	-				-0.4
1,443,502	-				-0.1
1,443,597	+				+1.0
1,443,599	+				-0.6
1,443,599	+				-0.0
1,443,606	+				+1.8
1,443,723	-		Synpcc7942_1394	0.10	+1.6
1,443,723	-		Synpcc7942_1394	0.10	+1.2
1,443,766	-		Synpcc7942_1394	0.12	+1.6
1,443,788	-		Synpcc7942_1394	0.14	+1.9
1,443,835	+		Synpcc7942_1394	0.16	+2.2
1,443,861	+		Synpcc7942_1394	0.18	+1.6
1,443,882	+		Synpcc7942_1394	0.19	+1.7
1,443,882	+		Synpcc7942_1394	0.19	-0.0
1,443,907	+		Synpcc7942_1394	0.20	+1.5
1,443,926	+		Synpcc7942_1394	0.22	+1.1
1,443,930	+		Synpcc7942_1394	0.22	-0.0
1,443,974	+		Synpcc7942_1394	0.24	+2.0
1,443,997	+		Synpcc7942_1394	0.26	+1.7
1,444,022	-		Synpcc7942_1394	0.27	+2.1
1,444,029	+		Synpcc7942_1394	0.27	+2.1
1,444,034	+		Synpcc7942_1394	0.28	+1.2
1,444,039	+		Synpcc7942_1394	0.28	+1.5
1,444,102	+		Synpcc7942_1394	0.32	+1.8
1,444,157	+		Synpcc7942_1394	0.35	+1.6
1,444,172	+		Synpcc7942_1394	0.35	+3.8
1,444,218	-		Synpcc7942_1394	0.38	+1.2
1,444,229	+		Synpcc7942_1394	0.39	+0.2
1,444,237	-		Synpcc7942_1394	0.39	+2.4
1,444,239	-				+0.3
1,444,241	+		Synpcc7942_1394	0.39	+1.7
1,444,249	-		Synpcc7942_1394	0.40	+1.1
1,444,249	-		Synpcc7942_1394	0.40	+0.0
1,444,267	+		Synpcc7942_1394	0.41	+2.2
1,444,267	-		Synpcc7942_1394	0.41	+0.9
1,444,272	+		Synpcc7942_1394	0.41	+1.1
1,444,282	+		Synpcc7942_1394	0.42	+1.6
1,444,290	-		Synpcc7942_1394	0.42	+1.3
1,444,305	+		Synpcc7942_1394	0.43	+1.1
1,444,313	-		Synpcc7942_1394	0.43	+1.0
1,444,313	-		Synpcc7942_1394	0.43	+2.1
1,444,313	-		Synpcc7942_1394	0.43	+0.3
1,444,337	+		Synpcc7942_1394	0.45	+1.6
1,444,412	+		Synpcc7942_1394	0.49	+1.2
1,444,419	-		Synpcc7942_1394	0.49	+1.5
1,444,420	-		Synpcc7942_1394	0.50	+1.3
1,444,451	-		Synpcc7942_1394	0.51	+1.2
1,444,468	+		Synpcc7942_1394	0.52	-1.0
1,444,468	+		Synpcc7942_1394	0.52	+0.7
1,444,470	-		Synpcc7942_1394	0.52	+1.2
1,444,473	+		Synpcc7942_1394	0.53	+1.4
1,444,476	-		Synpcc7942_1394	0.53	+2.2
1,444,476	-		Synpcc7942_1394	0.53	+0.5
1,444,479	+		Synpcc7942_1394	0.53	+1.9
1,444,482	-		Synpcc7942_1394	0.53	+2.0
1,444,526	+		Synpcc7942_1394	0.56	+2.8
1,444,534	-		Synpcc7942_1394	0.56	+1.1
1,444,556	+		Synpcc7942_1394	0.57	+0.6
1,444,563	+		Synpcc7942_1394	0.58	+1.9
1,444,563	+		Synpcc7942_1394	0.58	+1.9
1,444,563	+		Synpcc7942_1394	0.58	+1.3
1,444,564	-		Synpcc7942_1394	0.58	+0.6
1,444,564	-		Synpcc7942_1394	0.58	+2.3
1,444,564	-		Synpcc7942_1394	0.58	+1.5
1,444,584	-		Synpcc7942_1394	0.59	+1.3
1,444,599	+		Synpcc7942_1394	0.60	-2.3
1,444,663	+		Synpcc7942_1394	0.63	+0.6
1,444,761	-		Synpcc7942_1394	0.69	+2.1
1,444,774	-		Synpcc7942_1394	0.70	-0.3
1,444,792	-		Synpcc7942_1394	0.71	+2.1
1,444,806	-		Synpcc7942_1394	0.71	+1.9
1,444,819	+		Synpcc7942_1394	0.72	+2.0
1,444,860	+		Synpcc7942_1394	0.74	+2.0
1,444,863	-		Synpcc7942_1394	0.75	+1.5
1,444,888	-				+1.3
1,444,933	-		Synpcc7942_1394	0.79	+1.5
1,444,936	+		Synpcc7942_1394	0.79	-0.5
1,444,950	+		Synpcc7942_1394	0.80	+1.5
1,444,950	+		Synpcc7942_1394	0.80	+0.5
1,444,951	-		Synpcc7942_1394	0.80	+1.4
1,444,960	+		Synpcc7942_1394	0.80	+0.0
1,444,972	+		Synpcc7942_1394	0.81	-0.0
1,444,972	+		Synpcc7942_1394	0.81	+2.2
1,444,972	+		Synpcc7942_1394	0.81	+0.9
1,444,972	+		Synpcc7942_1394	0.81	+1.6
1,444,980	-		Synpcc7942_1394	0.81	+1.9
1,444,980	-		Synpcc7942_1394	0.81	+1.2
1,444,980	-		Synpcc7942_1394	0.81	+0.5
1,444,980	-		Synpcc7942_1394	0.81	+0.0
1,444,980	-		Synpcc7942_1394	0.81	+1.2
1,444,980	-		Synpcc7942_1394	0.81	+1.8
1,444,990	-		Synpcc7942_1394	0.82	+1.8
1,444,995	-		Synpcc7942_1394	0.82	-2.9
1,445,003	-		Synpcc7942_1394	0.83	+0.3
1,445,003	-		Synpcc7942_1394	0.83	+1.7
1,445,033	+		Synpcc7942_1394	0.84	+1.3
1,445,052	+		Synpcc7942_1394	0.85	+0.2
1,445,052	+		Synpcc7942_1394	0.85	+1.1
1,445,052	+		Synpcc7942_1394	0.85	+2.2
1,445,060	-		Synpcc7942_1394	0.86	+1.6
1,445,081	+		Synpcc7942_1394	0.87	+1.1
1,445,081	+		Synpcc7942_1394	0.87	+0.5
1,445,089	-		Synpcc7942_1394	0.87	+2.1
1,445,089	-		Synpcc7942_1394	0.87	+1.5
1,445,103	+		Synpcc7942_1394	0.88	+1.4
1,445,111	-		Synpcc7942_1394	0.89	+1.8
1,445,131	+		Synpcc7942_1394	0.90	+1.6
1,445,142	+				+2.3
1,445,142	+				+2.2
1,445,150	-				+1.4
1,445,156	-				+1.6
1,445,175	+				+0.2
1,445,175	+				+1.9
1,445,224	+				+1.8
1,445,224	+				+1.3
1,445,224	+				+2.8
1,445,257	-				+1.9
1,445,284	+				+1.8
1,445,289	+				+1.5
1,445,292	-				+0.7
1,445,342	+				+0.5
1,445,342	+				+0.2
1,445,390	-		Synpcc7942_1395	0.20	+0.4
1,445,390	-		Synpcc7942_1395	0.20	+0.8
1,445,403	-		Synpcc7942_1395	0.23	-0.6
1,445,423	-		Synpcc7942_1395	0.28	-0.1
1,445,434	+		Synpcc7942_1395	0.30	+0.1
1,445,444	-		Synpcc7942_1395	0.33	+1.4
1,445,444	-		Synpcc7942_1395	0.33	-0.4
1,445,444	-		Synpcc7942_1395	0.33	+0.2
1,445,473	+		Synpcc7942_1395	0.40	-0.3
1,445,508	+		Synpcc7942_1395	0.48	-0.6
1,445,522	+		Synpcc7942_1395	0.51	-0.5
1,445,527	+		Synpcc7942_1395	0.53	+1.5
1,445,527	+		Synpcc7942_1395	0.53	-0.1
1,445,529	+		Synpcc7942_1395	0.53	-0.1
1,445,574	+		Synpcc7942_1395	0.64	-0.3
1,445,594	-		Synpcc7942_1395	0.69	+0.1
1,445,601	-		Synpcc7942_1395	0.70	+1.5
1,445,621	+		Synpcc7942_1395	0.75	-0.2
1,445,630	+		Synpcc7942_1395	0.77	-0.1
1,445,630	+		Synpcc7942_1395	0.77	-0.8
1,445,638	-		Synpcc7942_1395	0.79	+0.2
1,445,638	-		Synpcc7942_1395	0.79	+1.2
1,445,647	+		Synpcc7942_1395	0.81	+0.5
1,445,672	+		Synpcc7942_1395	0.87	-0.4
1,445,680	-		Synpcc7942_1395	0.89	-1.0
1,445,684	+				+0.3
1,445,706	-				+0.2
1,445,711	-				-1.0
1,445,716	-				-1.4
1,445,716	-				+1.1
1,445,716	-				-1.7
1,445,716	-				+0.2
1,445,740	+				-0.2
1,445,740	+				-0.9
1,445,748	-				+0.2
1,445,749	-				+0.2
1,445,780	-		Synpcc7942_1396	0.14	+0.1
1,445,785	+		Synpcc7942_1396	0.16	+1.0
1,445,792	+		Synpcc7942_1396	0.19	+0.9
1,445,820	+		Synpcc7942_1396	0.30	-1.9
1,445,831	+		Synpcc7942_1396	0.34	+0.0
1,445,831	+		Synpcc7942_1396	0.34	-0.1
1,445,839	-		Synpcc7942_1396	0.37	-1.1
1,445,839	-		Synpcc7942_1396	0.37	+0.4
1,445,873	-		Synpcc7942_1396	0.50	-0.9
1,445,875	-		Synpcc7942_1396	0.51	+0.2
1,445,885	-		Synpcc7942_1396	0.55	-0.3
1,445,921	+		Synpcc7942_1396	0.69	-0.6
1,445,921	+		Synpcc7942_1396	0.69	-0.4
1,445,921	+		Synpcc7942_1396	0.69	-1.2
1,445,921	+		Synpcc7942_1396	0.69	+0.3
1,445,929	-		Synpcc7942_1396	0.72	+1.0
1,445,967	+		Synpcc7942_1396	0.87	+1.5
1,445,970	-		Synpcc7942_1396	0.88	+0.3
1,445,981	+				-0.6
1,445,994	+				+1.2
1,445,999	+				+0.1
1,446,026	+				+1.1
1,446,041	+				+0.1
1,446,041	+				+2.3
1,446,043	-				-0.1
1,446,049	+				-0.7
1,446,049	-				+0.2
1,446,049	-				-0.5
1,446,057	-				+0.1
1,446,110	-				-1.9
1,446,139	+				-2.1
1,446,147	-				+0.5
1,446,169	+				+0.7
1,446,169	+				-0.0
1,446,171	+				-1.6
1,446,171	+				-0.1
1,446,173	+				-0.2
1,446,179	-				+0.6
1,446,179	-				+0.3
1,446,179	-				-0.8
1,446,179	-				-0.0
1,446,216	+				+1.0
1,446,224	-				+0.2
1,446,224	-				+0.8
1,446,224	-				+0.8
1,446,224	-				-0.7
1,446,231	-				-1.0
1,446,238	-				+1.3
1,446,296	+				-0.9
1,446,298	+				-0.0
1,446,298	+				+0.1
1,446,306	-				+0.6
1,446,306	-				+0.9