Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1199

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,227,257	-				-0.2
1,227,333	+				-1.2
1,227,333	+				-3.4
1,227,363	-				-1.2
1,227,422	+		Synpcc7942_1199	0.17	-2.0
1,227,422	+		Synpcc7942_1199	0.17	-1.3
1,227,422	+		Synpcc7942_1199	0.17	-0.6
1,227,427	+		Synpcc7942_1199	0.18	-0.2
1,227,430	-		Synpcc7942_1199	0.18	-0.8
1,227,431	-		Synpcc7942_1199	0.18	-1.6
1,227,431	-		Synpcc7942_1199	0.18	+1.0
1,227,434	+		Synpcc7942_1199	0.19	-2.0
1,227,442	-		Synpcc7942_1199	0.20	-1.8
1,227,442	-		Synpcc7942_1199	0.20	-1.1
1,227,479	+		Synpcc7942_1199	0.25	+0.2
1,227,482	-		Synpcc7942_1199	0.25	-1.1
1,227,482	-		Synpcc7942_1199	0.25	-1.3
1,227,513	-		Synpcc7942_1199	0.30	-1.0
1,227,537	+		Synpcc7942_1199	0.33	-1.0
1,227,543	-		Synpcc7942_1199	0.34	+0.0
1,227,551	+		Synpcc7942_1199	0.35	-1.0
1,227,557	+		Synpcc7942_1199	0.36	-2.1
1,227,559	-		Synpcc7942_1199	0.36	-2.0
1,227,564	+		Synpcc7942_1199	0.37	-1.5
1,227,569	+		Synpcc7942_1199	0.38	-0.8
1,227,572	-		Synpcc7942_1199	0.38	-1.3
1,227,618	+		Synpcc7942_1199	0.45	-0.3
1,227,625	+		Synpcc7942_1199	0.46	-2.3
1,227,641	+		Synpcc7942_1199	0.48	-1.4
1,227,694	+		Synpcc7942_1199	0.55	-1.0
1,227,755	+		Synpcc7942_1199	0.64	-3.1
1,227,763	-		Synpcc7942_1199	0.65	-1.0
1,227,783	-		Synpcc7942_1199	0.68	-1.8
1,227,785	+		Synpcc7942_1199	0.68	-0.8
1,227,790	+		Synpcc7942_1199	0.69	-1.2
1,227,800	+		Synpcc7942_1199	0.70	-1.0
1,227,800	+		Synpcc7942_1199	0.70	-1.2
1,227,808	-		Synpcc7942_1199	0.72	-1.9
1,227,808	-		Synpcc7942_1199	0.72	-2.5
1,227,834	-		Synpcc7942_1199	0.75	-1.5
1,227,834	-		Synpcc7942_1199	0.75	-2.7
1,227,839	+		Synpcc7942_1199	0.76	-0.5
1,227,839	+		Synpcc7942_1199	0.76	-1.4
1,227,928	+		Synpcc7942_1199	0.89	-1.0
1,227,990	-				-1.0
1,227,990	-				-0.7
1,227,993	-				-1.2
1,228,026	-				-1.9
1,228,026	-				-0.7
1,228,026	-				-1.9
1,228,026	-				-2.4
1,228,079	-				-0.3
1,228,082	+				+0.3
1,228,082	+				+1.1
1,228,082	+				-0.3
1,228,082	+				-0.5
1,228,082	+				+0.1
1,228,084	-				+1.0
1,228,084	-				+0.6
1,228,090	-				+0.8
1,228,090	-				-0.9
1,228,092	-				+1.6
1,228,116	+				+1.0
1,228,132	+				+0.1
1,228,145	-				-0.8
1,228,234	+		Synpcc7942_1200	0.18	+0.5
1,228,263	+		Synpcc7942_1200	0.21	+0.4
1,228,279	+		Synpcc7942_1200	0.23	+0.9
1,228,292	+		Synpcc7942_1200	0.24	+0.8
1,228,293	-		Synpcc7942_1200	0.24	-0.6
1,228,311	-		Synpcc7942_1200	0.26	-0.5
1,228,405	-		Synpcc7942_1200	0.35	+0.6
1,228,462	+		Synpcc7942_1200	0.41	-1.7
1,228,470	-		Synpcc7942_1200	0.42	+0.4
1,228,483	+		Synpcc7942_1200	0.43	-0.9
1,228,483	+		Synpcc7942_1200	0.43	+0.2
1,228,483	+		Synpcc7942_1200	0.43	-1.5
1,228,483	+		Synpcc7942_1200	0.43	-0.9
1,228,483	+		Synpcc7942_1200	0.43	+0.2
1,228,483	+		Synpcc7942_1200	0.43	-2.2
1,228,491	-		Synpcc7942_1200	0.44	+0.2
1,228,491	-		Synpcc7942_1200	0.44	+0.5
1,228,491	-		Synpcc7942_1200	0.44	-1.6
1,228,491	-		Synpcc7942_1200	0.44	-0.2
1,228,534	-		Synpcc7942_1200	0.48	-0.5
1,228,558	+		Synpcc7942_1200	0.50	+0.4
1,228,563	+		Synpcc7942_1200	0.51	-1.1
1,228,571	-		Synpcc7942_1200	0.52	+0.5
1,228,581	+		Synpcc7942_1200	0.53	+0.5
1,228,597	+		Synpcc7942_1200	0.54	+0.7
1,228,603	+		Synpcc7942_1200	0.55	+0.7
1,228,610	-		Synpcc7942_1200	0.55	-0.0
1,228,642	+		Synpcc7942_1200	0.59	-1.7
1,228,656	+		Synpcc7942_1200	0.60	+0.4
1,228,656	+		Synpcc7942_1200	0.60	-2.6
1,228,661	+		Synpcc7942_1200	0.60	-0.6
1,228,661	+		Synpcc7942_1200	0.60	+0.3
1,228,661	+		Synpcc7942_1200	0.60	-0.8
1,228,662	-		Synpcc7942_1200	0.61	+0.3
1,228,664	-		Synpcc7942_1200	0.61	-0.3
1,228,664	-		Synpcc7942_1200	0.61	+0.2
1,228,729	+		Synpcc7942_1200	0.67	+0.7
1,228,776	+		Synpcc7942_1200	0.72	-1.0
1,228,776	+		Synpcc7942_1200	0.72	+0.5
1,228,799	-		Synpcc7942_1200	0.74	-0.1
1,228,811	-		Synpcc7942_1200	0.75	+0.3
1,228,811	-		Synpcc7942_1200	0.75	-1.0
1,228,863	+		Synpcc7942_1200	0.80	+0.1
1,228,879	-		Synpcc7942_1200	0.82	-0.9
1,228,879	-		Synpcc7942_1200	0.82	-0.6
1,228,884	-		Synpcc7942_1200	0.82	-2.0
1,228,903	-		Synpcc7942_1200	0.84	+1.1
1,228,903	-		Synpcc7942_1200	0.84	-3.3
1,228,905	-		Synpcc7942_1200	0.85	-1.0
1,228,966	-				+0.3
1,228,971	+				-0.0
1,228,976	+				+0.2
1,228,979	-				+0.2
1,229,007	+				-0.4