Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1093

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,109,647	-				+0.8
1,109,654	+				-0.0
1,109,654	+				+0.7
1,109,654	+				-0.3
1,109,662	-				+0.4
1,109,664	+				-0.1
1,109,679	-				+0.5
1,109,708	-				-0.3
1,109,718	-				+0.7
1,109,728	+				+0.1
1,109,730	+				-0.7
1,109,730	+				+1.0
1,109,738	-				+0.6
1,109,748	-				+0.3
1,109,794	-				-1.3
1,109,850	-				-0.1
1,109,856	+				-0.1
1,109,941	-				-0.0
1,110,101	-		Synpcc7942_1092	0.15	-0.1
1,110,148	+		Synpcc7942_1092	0.22	+0.4
1,110,194	-		Synpcc7942_1092	0.29	-1.2
1,110,226	+		Synpcc7942_1092	0.34	+0.7
1,110,250	+		Synpcc7942_1092	0.37	+0.6
1,110,260	-		Synpcc7942_1092	0.39	+0.1
1,110,287	+		Synpcc7942_1092	0.43	+0.1
1,110,311	+		Synpcc7942_1092	0.47	+0.5
1,110,319	-		Synpcc7942_1092	0.48	-1.1
1,110,473	-		Synpcc7942_1092	0.71	+0.7
1,110,486	+		Synpcc7942_1092	0.73	-0.2
1,110,504	-		Synpcc7942_1092	0.76	-1.3
1,110,601	-				+0.7
1,110,627	-				+0.7
1,110,630	+				-0.1
1,110,637	-				-0.4
1,110,637	-				-0.6
1,110,638	-				+0.3
1,110,650	-				-2.6
1,110,745	-				+3.0
1,110,776	-	anmK	Synpcc7942_1093	0.12	+2.7
1,110,777	-	anmK	Synpcc7942_1093	0.12	+3.3
1,110,864	+	anmK	Synpcc7942_1093	0.19	+3.4
1,110,887	+	anmK	Synpcc7942_1093	0.21	+1.0
1,110,895	-	anmK	Synpcc7942_1093	0.22	+1.6
1,110,914	+	anmK	Synpcc7942_1093	0.24	+2.3
1,110,969	+	anmK	Synpcc7942_1093	0.29	+2.2
1,110,969	+	anmK	Synpcc7942_1093	0.29	+2.2
1,110,980	+	anmK	Synpcc7942_1093	0.30	+2.9
1,111,070	+	anmK	Synpcc7942_1093	0.37	+3.0
1,111,072	+	anmK	Synpcc7942_1093	0.38	+2.7
1,111,108	+	anmK	Synpcc7942_1093	0.41	+3.7
1,111,116	-	anmK	Synpcc7942_1093	0.42	+2.9
1,111,129	-	anmK	Synpcc7942_1093	0.43	+2.7
1,111,153	-	anmK	Synpcc7942_1093	0.45	+2.4
1,111,181	-	anmK	Synpcc7942_1093	0.47	+2.7
1,111,186	-	anmK	Synpcc7942_1093	0.48	+3.4
1,111,192	+	anmK	Synpcc7942_1093	0.48	+2.7
1,111,214	-	anmK	Synpcc7942_1093	0.50	+2.8
1,111,254	+	anmK	Synpcc7942_1093	0.54	+2.1
1,111,283	+	anmK	Synpcc7942_1093	0.56	+2.7
1,111,327	+	anmK	Synpcc7942_1093	0.60	+1.0
1,111,359	-	anmK	Synpcc7942_1093	0.63	+3.0
1,111,361	+	anmK	Synpcc7942_1093	0.63	+2.5
1,111,372	+	anmK	Synpcc7942_1093	0.64	+3.1
1,111,396	+	anmK	Synpcc7942_1093	0.66	+3.0
1,111,398	+	anmK	Synpcc7942_1093	0.66	+2.3
1,111,406	-	anmK	Synpcc7942_1093	0.67	+1.3
1,111,407	-	anmK	Synpcc7942_1093	0.67	+2.4
1,111,431	+	anmK	Synpcc7942_1093	0.69	+3.2
1,111,439	-	anmK	Synpcc7942_1093	0.70	+3.6
1,111,447	-	anmK	Synpcc7942_1093	0.71	+3.0
1,111,449	+	anmK	Synpcc7942_1093	0.71	+3.0
1,111,452	-	anmK	Synpcc7942_1093	0.71	+2.3
1,111,457	-	anmK	Synpcc7942_1093	0.72	+2.1
1,111,457	-	anmK	Synpcc7942_1093	0.72	+2.5
1,111,497	-	anmK	Synpcc7942_1093	0.75	+3.0
1,111,498	+	anmK	Synpcc7942_1093	0.75	-0.6
1,111,516	+	anmK	Synpcc7942_1093	0.77	+2.9
1,111,521	+	anmK	Synpcc7942_1093	0.77	+2.4
1,111,524	-	anmK	Synpcc7942_1093	0.77	-0.3
1,111,524	-	anmK	Synpcc7942_1093	0.77	+0.9
1,111,524	-	anmK	Synpcc7942_1093	0.77	-0.3
1,111,529	-	anmK	Synpcc7942_1093	0.78	+2.7
1,111,529	-	anmK	Synpcc7942_1093	0.78	+3.0
1,111,541	+	anmK	Synpcc7942_1093	0.79	+3.4
1,111,570	-	anmK	Synpcc7942_1093	0.81	+2.5
1,111,586	-	anmK	Synpcc7942_1093	0.83	+1.6
1,111,617	-	anmK	Synpcc7942_1093	0.86	+3.2
1,111,648	+	anmK	Synpcc7942_1093	0.88	+2.3
1,111,648	+	anmK	Synpcc7942_1093	0.88	+2.9
1,111,662	-	anmK	Synpcc7942_1093	0.90	+2.9
1,111,689	+				+2.5
1,111,689	-				+2.5
1,111,691	+				+2.1
1,111,691	+				+2.8
1,111,691	+				+3.4
1,111,691	+				+2.7
1,111,691	+				+2.7
1,111,691	+				+3.0
1,111,691	+				+2.1
1,111,691	+				+2.7
1,111,697	-				+2.4
1,111,699	-				+2.8
1,111,699	-				+1.4
1,111,699	-				+3.5
1,111,699	-				+2.9
1,111,699	-				+2.2
1,111,699	-				+2.1
1,111,699	-				+2.3
1,111,699	-				+1.5
1,111,699	-				+0.5
1,111,699	-				+2.0
1,111,741	+				+2.6
1,111,746	+				+2.7
1,111,782	+				+0.2
1,111,815	-				+0.4
1,111,822	-				-2.1
1,111,839	+				-2.6
1,111,847	-				+0.9
1,111,847	-				-1.6
1,111,903	-				-0.6
1,111,905	+				-1.8
1,111,913	-				-2.7
1,111,915	+				+0.4
1,111,915	+				+0.2
1,111,923	-				+0.5
1,111,923	-				+0.9
1,111,923	-				-1.4
1,111,945	-				-1.6
1,111,969	+				+0.4
1,111,969	+				+0.1
1,111,969	+				-1.1
1,111,970	+				-1.0
1,111,970	+				+0.1
1,111,970	-				+0.5
1,111,977	-				-1.1
1,111,977	-				-0.5
1,111,978	-				-0.2
1,111,978	-				+0.3
1,111,978	-				+1.3
1,111,980	-		Synpcc7942_1094	0.10	-0.1
1,111,985	-		Synpcc7942_1094	0.11	+1.1
1,111,990	-		Synpcc7942_1094	0.12	-0.1
1,112,016	+		Synpcc7942_1094	0.16	+0.2
1,112,018	+		Synpcc7942_1094	0.16	+0.4
1,112,026	-		Synpcc7942_1094	0.17	+0.6
1,112,026	-		Synpcc7942_1094	0.17	+0.3
1,112,026	-		Synpcc7942_1094	0.17	-0.2
1,112,039	-		Synpcc7942_1094	0.20	-1.3
1,112,047	+		Synpcc7942_1094	0.21	-0.5
1,112,047	-		Synpcc7942_1094	0.21	+0.2
1,112,052	+		Synpcc7942_1094	0.22	+0.4
1,112,062	+		Synpcc7942_1094	0.23	-0.5
1,112,071	-		Synpcc7942_1094	0.25	+0.6
1,112,071	-		Synpcc7942_1094	0.25	-0.3
1,112,078	+		Synpcc7942_1094	0.26	-0.3
1,112,086	-		Synpcc7942_1094	0.27	+0.6
1,112,108	+				-0.2
1,112,108	+		Synpcc7942_1094	0.31	-0.8
1,112,108	+		Synpcc7942_1094	0.31	-0.7
1,112,108	+		Synpcc7942_1094	0.31	+0.0
1,112,108	+		Synpcc7942_1094	0.31	+0.9
1,112,111	-		Synpcc7942_1094	0.31	+1.9
1,112,116	-		Synpcc7942_1094	0.32	-1.7
1,112,129	+		Synpcc7942_1094	0.34	+0.6
1,112,136	+		Synpcc7942_1094	0.35	-0.4
1,112,137	-		Synpcc7942_1094	0.35	+0.0
1,112,141	+		Synpcc7942_1094	0.36	+0.6
1,112,175	+		Synpcc7942_1094	0.42	-0.6
1,112,183	+		Synpcc7942_1094	0.43	+0.1
1,112,183	+		Synpcc7942_1094	0.43	-0.3
1,112,228	+		Synpcc7942_1094	0.50	+0.5
1,112,228	+		Synpcc7942_1094	0.50	+1.3
1,112,233	+		Synpcc7942_1094	0.51	-0.5
1,112,238	+		Synpcc7942_1094	0.52	+0.0
1,112,269	+		Synpcc7942_1094	0.57	+0.7
1,112,284	+		Synpcc7942_1094	0.59	-1.2
1,112,284	+		Synpcc7942_1094	0.59	-0.3
1,112,286	+		Synpcc7942_1094	0.60	-0.3
1,112,286	-		Synpcc7942_1094	0.60	+0.3
1,112,286	-		Synpcc7942_1094	0.60	-0.6
1,112,294	-		Synpcc7942_1094	0.61	+1.0
1,112,305	-		Synpcc7942_1094	0.63	-0.0
1,112,314	-		Synpcc7942_1094	0.64	-0.8
1,112,361	+		Synpcc7942_1094	0.72	+0.2
1,112,361	+		Synpcc7942_1094	0.72	-0.2
1,112,361	+		Synpcc7942_1094	0.72	-0.2
1,112,361	+		Synpcc7942_1094	0.72	+1.8
1,112,369	+		Synpcc7942_1094	0.73	+1.5
1,112,369	+		Synpcc7942_1094	0.73	+0.2
1,112,369	-		Synpcc7942_1094	0.73	-0.3
1,112,377	-		Synpcc7942_1094	0.74	-0.1
1,112,377	-		Synpcc7942_1094	0.74	-0.1
1,112,377	-		Synpcc7942_1094	0.74	-0.4
1,112,377	-		Synpcc7942_1094	0.74	-0.2
1,112,414	+		Synpcc7942_1094	0.80	-2.8
1,112,440	-		Synpcc7942_1094	0.84	-0.1
1,112,446	+		Synpcc7942_1094	0.85	+0.4
1,112,455	-		Synpcc7942_1094	0.87	+0.6
1,112,471	-		Synpcc7942_1094	0.89	+0.9
1,112,515	+				-0.2
1,112,543	-				+0.8
1,112,565	+				-1.7
1,112,571	-				+1.0
1,112,577	-				-1.4
1,112,582	-				-0.4
1,112,587	+				-0.1
1,112,590	-				+0.3
1,112,643	+				+0.5
1,112,652	+				-1.4
1,112,652	+				-0.5
1,112,654	+				-0.4
1,112,659	+				-1.1
1,112,670	+				-2.9
1,112,676	+				-0.2
1,112,691	+				-0.5
1,112,691	+				-0.2
1,112,691	+				-2.0
1,112,699	-				-0.8
1,112,699	-				-0.5
1,112,702	-				+0.6
1,112,708	-				+0.4
1,112,715	+				-0.0
1,112,718	+				+1.5
1,112,718	+				-0.5
1,112,737	+				-2.1
1,112,737	+				+0.8
1,112,745	-				-0.6
1,112,748	+				-0.3
1,112,756	-				+0.1
1,112,756	-				-2.3
1,112,756	-				+0.5
1,112,778	+				+0.2