Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1078

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,086,859	-		Synpcc7942_1076	0.67	-1.3
1,086,912	-		Synpcc7942_1076	0.79	+0.4
1,086,939	+		Synpcc7942_1076	0.86	-1.2
1,086,947	-		Synpcc7942_1076	0.88	+1.0
1,086,947	-		Synpcc7942_1076	0.88	-0.6
1,086,947	-		Synpcc7942_1076	0.88	+1.4
1,086,991	+				+0.8
1,087,101	+				-0.3
1,087,108	+				+0.6
1,087,111	-				+0.1
1,087,114	-				-0.0
1,087,125	+				-0.9
1,087,132	+				+0.4
1,087,133	-				+0.2
1,087,176	+				-0.4
1,087,176	+				+1.0
1,087,184	-				-0.5
1,087,184	-				-1.0
1,087,184	-				-0.6
1,087,184	-				-1.3
1,087,184	-				+0.7
1,087,184	-				-1.1
1,087,185	-				+0.3
1,087,185	-				-0.9
1,087,198	+				+0.8
1,087,203	+				-0.8
1,087,203	+				-2.0
1,087,203	+				-0.0
1,087,203	+				+1.6
1,087,206	-				-0.2
1,087,208	-				-0.3
1,087,210	+				+0.0
1,087,210	+				-0.9
1,087,210	+				-1.1
1,087,210	+				-0.9
1,087,210	+				-0.8
1,087,211	-				-0.3
1,087,211	-				-0.6
1,087,211	-				+1.0
1,087,211	-				+0.5
1,087,213	-				+0.9
1,087,218	-				-1.1
1,087,218	-				-0.3
1,087,218	-				+0.5
1,087,218	-				+0.1
1,087,218	-				-0.0
1,087,218	-				+0.1
1,087,218	-				-0.3
1,087,218	-				+1.6
1,087,234	+				-0.5
1,087,240	+				+0.6
1,087,306	-				-1.5
1,087,329	-				+0.3
1,087,350	+				+1.0
1,087,358	-				-0.8
1,087,388	+		Synpcc7942_1077	0.20	-0.5
1,087,389	+		Synpcc7942_1077	0.20	+0.9
1,087,402	-		Synpcc7942_1077	0.24	-0.9
1,087,402	-		Synpcc7942_1077	0.24	+1.6
1,087,402	-		Synpcc7942_1077	0.24	+0.8
1,087,404	+		Synpcc7942_1077	0.25	+0.3
1,087,430	-		Synpcc7942_1077	0.33	+0.4
1,087,436	+		Synpcc7942_1077	0.35	-0.9
1,087,444	-		Synpcc7942_1077	0.38	+0.7
1,087,444	-		Synpcc7942_1077	0.38	-0.2
1,087,444	-		Synpcc7942_1077	0.38	-0.5
1,087,444	-		Synpcc7942_1077	0.38	+1.3
1,087,461	+		Synpcc7942_1077	0.43	+0.2
1,087,470	-		Synpcc7942_1077	0.46	+0.6
1,087,473	+		Synpcc7942_1077	0.47	+0.2
1,087,502	-		Synpcc7942_1077	0.56	+0.2
1,087,514	+		Synpcc7942_1077	0.60	+0.3
1,087,537	+		Synpcc7942_1077	0.67	-0.2
1,087,637	+				-0.0
1,087,645	-				-0.0
1,087,659	+				+0.5
1,087,667	-				-1.6
1,087,699	+				+0.5
1,087,704	+				+0.5
1,087,712	-				+1.3
1,087,737	+				+1.0
1,087,737	+				+1.8
1,087,737	+				+1.8
1,087,737	+				+1.4
1,087,737	+				+1.4
1,087,745	-				-0.4
1,087,745	-				+1.0
1,087,745	-				-0.4
1,087,760	+				+0.1
1,087,815	+				+0.8
1,087,823	-				+2.4
1,087,825	+				+1.1
1,087,825	+				+1.9
1,087,825	+				+2.7
1,087,825	+				+2.2
1,087,833	-				+2.6
1,087,833	-				-0.2
1,087,833	-				+2.9
1,087,833	-				+1.0
1,087,853	+				+1.8
1,087,859	+				-0.1
1,087,869	-				+2.4
1,087,883	-		Synpcc7942_1078	0.11	+2.3
1,087,893	+		Synpcc7942_1078	0.12	+1.0
1,087,901	-		Synpcc7942_1078	0.13	-0.3
1,087,901	-		Synpcc7942_1078	0.13	+2.1
1,087,905	+		Synpcc7942_1078	0.14	+1.8
1,087,905	+		Synpcc7942_1078	0.14	+1.6
1,087,905	+		Synpcc7942_1078	0.14	+2.1
1,087,905	+		Synpcc7942_1078	0.14	+2.0
1,087,905	+		Synpcc7942_1078	0.14	+1.3
1,087,905	+		Synpcc7942_1078	0.14	+1.9
1,087,905	+		Synpcc7942_1078	0.14	+1.1
1,087,905	+		Synpcc7942_1078	0.14	+1.7
1,087,905	+		Synpcc7942_1078	0.14	+0.9
1,087,905	+		Synpcc7942_1078	0.14	+2.3
1,087,905	+		Synpcc7942_1078	0.14	+1.2
1,087,905	+		Synpcc7942_1078	0.14	-0.7
1,087,905	+		Synpcc7942_1078	0.14	+0.9
1,087,913	-		Synpcc7942_1078	0.15	+1.6
1,087,913	-		Synpcc7942_1078	0.15	+2.8
1,087,913	-		Synpcc7942_1078	0.15	+0.4
1,087,913	-		Synpcc7942_1078	0.15	+1.6
1,087,913	-		Synpcc7942_1078	0.15	-0.9
1,088,013	+		Synpcc7942_1078	0.26	+1.2
1,088,034	-		Synpcc7942_1078	0.28	+1.6
1,088,034	-		Synpcc7942_1078	0.28	+1.5
1,088,034	-		Synpcc7942_1078	0.28	+2.0
1,088,078	-		Synpcc7942_1078	0.33	+2.1
1,088,090	-		Synpcc7942_1078	0.34	+0.8
1,088,098	+		Synpcc7942_1078	0.35	+1.3
1,088,116	-		Synpcc7942_1078	0.37	+1.9
1,088,194	+		Synpcc7942_1078	0.46	+1.4
1,088,207	+		Synpcc7942_1078	0.47	+1.0
1,088,218	+		Synpcc7942_1078	0.48	+2.0
1,088,235	+		Synpcc7942_1078	0.50	+1.6
1,088,250	+		Synpcc7942_1078	0.52	+1.3
1,088,258	-		Synpcc7942_1078	0.53	+2.7
1,088,258	-		Synpcc7942_1078	0.53	+2.3
1,088,258	-		Synpcc7942_1078	0.53	+1.4
1,088,298	+		Synpcc7942_1078	0.57	+1.3
1,088,314	-				+1.4
1,088,314	-		Synpcc7942_1078	0.59	+2.5
1,088,314	-		Synpcc7942_1078	0.59	+2.8
1,088,399	+		Synpcc7942_1078	0.68	+0.4
1,088,404	+		Synpcc7942_1078	0.69	+1.9
1,088,411	+		Synpcc7942_1078	0.69	+2.8
1,088,419	-				+2.4
1,088,429	-		Synpcc7942_1078	0.71	+1.4
1,088,476	-		Synpcc7942_1078	0.77	+1.3
1,088,492	-		Synpcc7942_1078	0.78	+1.3
1,088,524	+		Synpcc7942_1078	0.82	+1.7
1,088,532	-				+2.0
1,088,532	-		Synpcc7942_1078	0.83	+3.2
1,088,532	-		Synpcc7942_1078	0.83	+1.9
1,088,551	+		Synpcc7942_1078	0.85	+1.8
1,088,553	-		Synpcc7942_1078	0.85	+2.2
1,088,555	-		Synpcc7942_1078	0.85	+0.6
1,088,596	-		Synpcc7942_1078	0.90	+2.3
1,088,631	-				+2.2
1,088,650	+				+1.9
1,088,693	+				-2.6
1,088,702	-				+0.5
1,089,009	-	recG	Synpcc7942_1079	0.13	+0.3
1,089,063	-	recG	Synpcc7942_1079	0.15	-0.3