Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1071

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,082,776	+				-1.1
1,082,846	+				+0.6
1,082,906	+				-0.0
1,082,906	+				-0.0
1,082,906	+				-1.1
1,082,914	-				+0.9
1,082,918	+				-0.6
1,082,918	+				-1.3
1,082,919	+				-0.0
1,082,926	-				-0.6
1,082,970	-				-0.4
1,082,993	+				-0.6
1,082,993	+				+0.3
1,082,993	+				-1.9
1,082,999	-				+0.8
1,083,001	-				-0.8
1,083,001	-				-0.5
1,083,023	-				-1.6
1,083,027	+				+0.4
1,083,037	-				-0.2
1,083,039	-				-1.3
1,083,044	-				-0.4
1,083,044	-				+0.2
1,083,062	-				-2.3
1,083,072	-				-0.4
1,083,083	-				-1.3
1,083,102	-				+0.5
1,083,123	+				-0.5
1,083,131	-				-0.2
1,083,131	-				-0.9
1,083,153	-				-1.0
1,083,169	-				-0.3
1,083,171	-				-2.6
1,083,259	+		Synpcc7942_1071	0.20	-1.7
1,083,314	+				-0.7
1,083,322	-		Synpcc7942_1071	0.31	-1.2
1,083,322	-		Synpcc7942_1071	0.31	-1.3
1,083,333	+		Synpcc7942_1071	0.33	-1.5
1,083,402	+		Synpcc7942_1071	0.45	-1.4
1,083,410	-		Synpcc7942_1071	0.46	-2.2
1,083,410	-		Synpcc7942_1071	0.46	+0.0
1,083,410	-		Synpcc7942_1071	0.46	-0.2
1,083,422	-		Synpcc7942_1071	0.49	-0.6
1,083,427	-		Synpcc7942_1071	0.49	-0.4
1,083,429	+		Synpcc7942_1071	0.50	-1.2
1,083,478	-		Synpcc7942_1071	0.58	-1.9
1,083,504	-		Synpcc7942_1071	0.63	-0.7
1,083,512	+		Synpcc7942_1071	0.64	-1.7
1,083,531	-		Synpcc7942_1071	0.68	+0.2
1,083,533	+		Synpcc7942_1071	0.68	-1.2
1,083,546	-		Synpcc7942_1071	0.70	-1.3
1,083,549	+		Synpcc7942_1071	0.71	-3.6
1,083,577	+		Synpcc7942_1071	0.76	-1.0
1,083,584	+		Synpcc7942_1071	0.77	-0.8
1,083,598	-		Synpcc7942_1071	0.80	-0.3
1,083,600	-		Synpcc7942_1071	0.80	-1.2
1,083,620	-		Synpcc7942_1071	0.83	-0.5
1,083,687	+				-2.1
1,083,693	-				-0.1
1,083,700	-				-0.6
1,083,705	-				-0.6
1,083,710	-				-0.7
1,083,719	-				+1.3
1,083,733	+				-1.1
1,083,752	-				+0.2
1,083,754	+				+0.8
1,083,756	+				+0.6
1,083,769	+				+0.7
1,083,770	+				+0.2
1,083,855	-	cobO	Synpcc7942_1072	0.15	+1.8
1,084,278	-				+0.4
1,084,286	+				-0.6
1,084,317	+				+0.4
1,084,447	-				-2.9
1,084,462	-				+0.6
1,084,465	+				+1.4
1,084,479	+				+0.4
1,084,511	-				+0.3
1,084,511	-				-0.2
1,084,536	+	rph	Synpcc7942_1073	0.12	+0.7
1,084,541	+	rph	Synpcc7942_1073	0.13	+0.2
1,084,544	-	rph	Synpcc7942_1073	0.13	+0.5
1,084,549	-	rph	Synpcc7942_1073	0.14	-0.3
1,084,578	-	rph	Synpcc7942_1073	0.18	-1.3
1,084,578	-	rph	Synpcc7942_1073	0.18	+0.2
1,084,578	-				-0.3
1,084,578	-	rph	Synpcc7942_1073	0.18	+0.7
1,084,580	-	rph	Synpcc7942_1073	0.18	+0.2
1,084,583	-	rph	Synpcc7942_1073	0.18	-0.2
1,084,624	-	rph	Synpcc7942_1073	0.24	+0.5
1,084,630	-	rph	Synpcc7942_1073	0.25	+0.3
1,084,630	-	rph	Synpcc7942_1073	0.25	+0.6
1,084,635	-	rph	Synpcc7942_1073	0.26	+0.6
1,084,636	-	rph	Synpcc7942_1073	0.26	-0.1
1,084,646	-	rph	Synpcc7942_1073	0.27	+1.2
1,084,700	-	rph	Synpcc7942_1073	0.35	-2.2