Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1060

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,069,128	-		Synpcc7942_1059	0.24	-0.5
1,069,233	+		Synpcc7942_1059	0.36	+0.2
1,069,361	-		Synpcc7942_1059	0.49	+0.2
1,069,394	-		Synpcc7942_1059	0.53	-1.8
1,069,431	-		Synpcc7942_1059	0.57	-1.1
1,069,443	-		Synpcc7942_1059	0.58	+0.7
1,069,443	-		Synpcc7942_1059	0.58	+0.1
1,069,448	-		Synpcc7942_1059	0.59	+0.8
1,069,486	+		Synpcc7942_1059	0.63	-0.6
1,069,486	+		Synpcc7942_1059	0.63	+0.0
1,069,502	+		Synpcc7942_1059	0.64	+0.9
1,069,510	-		Synpcc7942_1059	0.65	+0.8
1,069,572	+		Synpcc7942_1059	0.72	+0.2
1,069,654	+		Synpcc7942_1059	0.81	-1.8
1,069,677	-		Synpcc7942_1059	0.83	-2.5
1,069,677	-		Synpcc7942_1059	0.83	-0.6
1,069,677	-		Synpcc7942_1059	0.83	+0.0
1,069,742	+				-0.4
1,069,750	+				-0.2
1,069,806	+				+0.1
1,069,828	+				+1.1
1,069,836	-				-0.6
1,069,836	-				+1.0
1,069,847	+				-0.7
1,069,855	-				+0.2
1,069,872	+				+0.8
1,069,872	+				+0.5
1,069,874	+				+0.3
1,069,880	-				+0.1
1,069,880	-				+0.3
1,069,940	+				+0.2
1,069,975	+				-1.0
1,069,983	-				-0.2
1,069,997	-				+0.6
1,069,997	-				+1.0
1,069,999	+				-0.8
1,070,008	+				-2.2
1,070,008	-				+0.7
1,070,065	-				+0.3
1,070,088	-				-0.5
1,070,089	-				+1.0
1,070,089	-				+0.3
1,070,090	+				+0.6
1,070,098	-				+1.3
1,070,143	-				-0.1
1,070,147	+				-0.8
1,070,176	-				-0.6
1,070,181	-				+0.0
1,070,216	-				-0.1
1,070,234	-		Synpcc7942_1060	0.10	-0.2
1,070,245	-		Synpcc7942_1060	0.11	+0.7
1,070,279	+		Synpcc7942_1060	0.13	+0.1
1,070,301	-		Synpcc7942_1060	0.14	+0.5
1,070,325	+		Synpcc7942_1060	0.15	-0.0
1,070,325	+		Synpcc7942_1060	0.15	+0.0
1,070,347	+		Synpcc7942_1060	0.16	-1.0
1,070,405	+		Synpcc7942_1060	0.19	-2.1
1,070,420	-		Synpcc7942_1060	0.19	-1.5
1,070,420	-		Synpcc7942_1060	0.19	-0.4
1,070,428	+		Synpcc7942_1060	0.20	+0.4
1,070,484	+		Synpcc7942_1060	0.23	-0.2
1,070,484	+		Synpcc7942_1060	0.23	-1.8
1,070,490	+		Synpcc7942_1060	0.23	-0.3
1,070,505	-		Synpcc7942_1060	0.24	-0.5
1,070,521	+		Synpcc7942_1060	0.24	-3.1
1,070,524	-		Synpcc7942_1060	0.25	-2.2
1,070,557	+		Synpcc7942_1060	0.26	-0.7
1,070,588	-		Synpcc7942_1060	0.28	-2.1
1,070,596	-		Synpcc7942_1060	0.28	-1.4
1,070,601	-				-1.2
1,070,621	-		Synpcc7942_1060	0.29	+0.1
1,070,661	-		Synpcc7942_1060	0.31	-0.3
1,070,681	+		Synpcc7942_1060	0.32	+0.3
1,070,697	+		Synpcc7942_1060	0.33	-0.2
1,070,699	+		Synpcc7942_1060	0.33	-1.0
1,070,707	-		Synpcc7942_1060	0.34	-0.6
1,070,821	+		Synpcc7942_1060	0.39	-2.1
1,070,896	+		Synpcc7942_1060	0.43	-2.9
1,070,906	+		Synpcc7942_1060	0.43	+0.9
1,070,923	+		Synpcc7942_1060	0.44	-0.3
1,070,925	+		Synpcc7942_1060	0.44	-0.3
1,070,933	+		Synpcc7942_1060	0.45	-1.5
1,070,933	+		Synpcc7942_1060	0.45	-0.6
1,070,933	-		Synpcc7942_1060	0.45	-1.0
1,070,952	+		Synpcc7942_1060	0.46	-1.7
1,070,968	-		Synpcc7942_1060	0.46	-0.9
1,070,977	+		Synpcc7942_1060	0.47	-1.3
1,071,038	+		Synpcc7942_1060	0.50	-0.6
1,071,038	+		Synpcc7942_1060	0.50	-0.6
1,071,046	-		Synpcc7942_1060	0.50	+0.3
1,071,046	-		Synpcc7942_1060	0.50	-1.8
1,071,083	-		Synpcc7942_1060	0.52	-0.2
1,071,146	-		Synpcc7942_1060	0.55	-1.6
1,071,211	+		Synpcc7942_1060	0.58	-1.2
1,071,244	+		Synpcc7942_1060	0.60	-0.3
1,071,257	-		Synpcc7942_1060	0.61	-0.8
1,071,257	-		Synpcc7942_1060	0.61	-0.5
1,071,273	-		Synpcc7942_1060	0.62	-0.8
1,071,305	+		Synpcc7942_1060	0.63	-0.7
1,071,348	-		Synpcc7942_1060	0.65	-2.3
1,071,370	-		Synpcc7942_1060	0.66	+0.0
1,071,376	+		Synpcc7942_1060	0.67	+0.5
1,071,382	+		Synpcc7942_1060	0.67	-1.5
1,071,382	+		Synpcc7942_1060	0.67	-2.5
1,071,382	+		Synpcc7942_1060	0.67	+0.6
1,071,390	-		Synpcc7942_1060	0.67	-0.4
1,071,411	+		Synpcc7942_1060	0.68	-0.9
1,071,414	-		Synpcc7942_1060	0.68	-0.5
1,071,474	+		Synpcc7942_1060	0.71	-0.2
1,071,482	-		Synpcc7942_1060	0.72	-0.9
1,071,503	-		Synpcc7942_1060	0.73	-1.0
1,071,608	-		Synpcc7942_1060	0.78	-2.5
1,071,617	-		Synpcc7942_1060	0.79	-0.9
1,071,646	+		Synpcc7942_1060	0.80	-1.0
1,071,657	+		Synpcc7942_1060	0.80	-0.6
1,071,710	-		Synpcc7942_1060	0.83	-0.5
1,071,716	+		Synpcc7942_1060	0.83	-1.4
1,071,724	-		Synpcc7942_1060	0.84	-1.6
1,071,752	+		Synpcc7942_1060	0.85	+0.2
1,071,771	-		Synpcc7942_1060	0.86	-0.1
1,071,811	+		Synpcc7942_1060	0.88	-0.7
1,071,811	+		Synpcc7942_1060	0.88	-0.7
1,071,819	-		Synpcc7942_1060	0.88	-0.3
1,071,830	-		Synpcc7942_1060	0.89	+0.2
1,071,841	-		Synpcc7942_1060	0.90	-0.9
1,071,854	+				-0.1
1,071,854	+				-0.5
1,071,881	+				-0.7
1,071,912	-				-0.0
1,071,959	+				-0.3
1,072,077	+				+0.6
1,072,085	-				+0.2
1,072,220	+				-0.1
1,072,225	+				-0.2
1,072,227	+				+0.8
1,072,241	-				+0.1
1,072,258	-				-1.3
1,072,285	+				+0.4
1,072,293	-				-0.4
1,072,293	-				-2.2
1,072,293	-				+0.4
1,072,297	+				-0.4
1,072,303	-				+0.1
1,072,418	+		Synpcc7942_1061	0.15	+0.5
1,072,418	+		Synpcc7942_1061	0.15	-1.6
1,072,444	-		Synpcc7942_1061	0.18	-0.0
1,072,453	+		Synpcc7942_1061	0.19	+0.8
1,072,468	+		Synpcc7942_1061	0.20	+0.2
1,072,489	-		Synpcc7942_1061	0.23	-0.8
1,072,495	-		Synpcc7942_1061	0.23	+0.6
1,072,529	+		Synpcc7942_1061	0.27	+0.5
1,072,529	-		Synpcc7942_1061	0.27	-0.0
1,072,571	+		Synpcc7942_1061	0.31	-2.0
1,072,571	+		Synpcc7942_1061	0.31	+0.3
1,072,571	+		Synpcc7942_1061	0.31	+0.2
1,072,574	-		Synpcc7942_1061	0.32	-0.0
1,072,579	-		Synpcc7942_1061	0.32	-0.1
1,072,579	-		Synpcc7942_1061	0.32	-1.7
1,072,579	-		Synpcc7942_1061	0.32	+0.2
1,072,668	+		Synpcc7942_1061	0.42	-0.3
1,072,691	-		Synpcc7942_1061	0.44	+0.8
1,072,691	-		Synpcc7942_1061	0.44	+1.6
1,072,691	-		Synpcc7942_1061	0.44	+0.0
1,072,701	+				+1.2
1,072,701	-		Synpcc7942_1061	0.45	-0.3
1,072,725	-		Synpcc7942_1061	0.48	-0.8
1,072,730	+		Synpcc7942_1061	0.48	-0.3
1,072,763	+		Synpcc7942_1061	0.52	+0.4
1,072,833	-		Synpcc7942_1061	0.59	+0.3
1,072,884	-		Synpcc7942_1061	0.65	-1.0
1,072,929	+		Synpcc7942_1061	0.70	+1.0
1,072,929	+				-0.2
1,072,959	+		Synpcc7942_1061	0.73	+0.1
1,072,961	+		Synpcc7942_1061	0.73	-1.3
1,072,961	+		Synpcc7942_1061	0.73	+0.7
1,072,961	+		Synpcc7942_1061	0.73	-0.2
1,072,961	+		Synpcc7942_1061	0.73	+0.4
1,072,961	+		Synpcc7942_1061	0.73	+0.4
1,072,961	+		Synpcc7942_1061	0.73	-0.2
1,072,969	-		Synpcc7942_1061	0.74	+0.3
1,072,969	-		Synpcc7942_1061	0.74	+0.3