Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1049

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
1,061,473	+				+0.2
1,061,503	-				-1.6
1,061,622	-	cpcH	Synpcc7942_1049	0.16	-0.5
1,061,828	+	cpcH	Synpcc7942_1049	0.41	-1.0
1,061,838	+	cpcH	Synpcc7942_1049	0.43	-1.0
1,062,056	+	cpcH	Synpcc7942_1049	0.69	-1.5
1,062,096	-	cpcH	Synpcc7942_1049	0.74	-2.3
1,062,246	+				+0.0
1,062,293	+				-2.4
1,062,312	-				+0.4
1,062,321	+				-1.6
1,062,346	-				-1.6
1,062,406	-				-1.2
1,062,445	+	cpcI	Synpcc7942_1050	0.10	-0.2
1,062,471	+	cpcI	Synpcc7942_1050	0.13	-1.6
1,062,471	+	cpcI	Synpcc7942_1050	0.13	-1.3
1,062,584	+	cpcI	Synpcc7942_1050	0.26	-1.6
1,062,592	-	cpcI	Synpcc7942_1050	0.27	-0.4
1,062,592	-	cpcI	Synpcc7942_1050	0.27	-1.8
1,062,599	+	cpcI	Synpcc7942_1050	0.28	-2.6
1,062,599	+	cpcI	Synpcc7942_1050	0.28	-0.6
1,062,599	+	cpcI	Synpcc7942_1050	0.28	-1.0
1,062,607	-	cpcI	Synpcc7942_1050	0.29	-1.1
1,062,671	-	cpcI	Synpcc7942_1050	0.36	-1.0
1,062,686	-	cpcI	Synpcc7942_1050	0.38	-1.7
1,062,691	-	cpcI	Synpcc7942_1050	0.38	-1.2
1,062,737	-	cpcI	Synpcc7942_1050	0.44	-0.6
1,062,816	+	cpcI	Synpcc7942_1050	0.53	-2.2
1,062,821	+	cpcI	Synpcc7942_1050	0.53	-1.0
1,062,827	-	cpcI	Synpcc7942_1050	0.54	-2.0
1,062,839	-	cpcI	Synpcc7942_1050	0.55	-0.6
1,062,849	-	cpcI	Synpcc7942_1050	0.57	-0.6
1,063,012	-	cpcI	Synpcc7942_1050	0.75	-2.7
1,063,013	-	cpcI	Synpcc7942_1050	0.75	-1.8
1,063,019	-	cpcI	Synpcc7942_1050	0.76	-1.5
1,063,022	+	cpcI	Synpcc7942_1050	0.76	-0.7
1,063,228	-				-1.0
1,063,228	-				-1.5
1,063,228	-				-0.5
1,063,228	-				-1.1
1,063,228	-				-1.0
1,063,286	-				-1.0