Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0790

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
784,326	+	gst1	Synpcc7942_0788	0.47	-1.2
784,331	+	gst1	Synpcc7942_0788	0.47	-2.2
784,334	-	gst1	Synpcc7942_0788	0.48	+1.3
784,419	+	gst1	Synpcc7942_0788	0.58	+0.3
784,432	-	gst1	Synpcc7942_0788	0.60	+0.4
784,501	-	gst1	Synpcc7942_0788	0.69	+1.7
784,541	+	gst1	Synpcc7942_0788	0.74	-0.7
784,574	-	gst1	Synpcc7942_0788	0.78	-0.6
784,627	-	gst1	Synpcc7942_0788	0.85	+1.5
784,661	-	gst1	Synpcc7942_0788	0.89	+0.7
784,758	+				-1.6
784,776	-				-1.0
784,800	-				-0.9
784,801	+				-0.0
784,807	+				-0.9
784,843	-				+0.3
784,847	-				-0.1
784,866	-				+0.8
784,866	-				+0.3
784,875	+				-0.5
784,903	+		Synpcc7942_0789	0.18	+0.4
784,909	-		Synpcc7942_0789	0.20	+0.7
784,917	-		Synpcc7942_0789	0.23	+1.6
784,957	+		Synpcc7942_0789	0.35	-2.3
784,965	-		Synpcc7942_0789	0.37	+0.7
784,965	-		Synpcc7942_0789	0.37	+0.4
784,978	-		Synpcc7942_0789	0.41	-0.6
784,991	+		Synpcc7942_0789	0.45	-2.1
785,025	-		Synpcc7942_0789	0.56	+0.3
785,032	-		Synpcc7942_0789	0.58	-0.1
785,034	+		Synpcc7942_0789	0.59	-0.0
785,034	+		Synpcc7942_0789	0.59	+0.6
785,062	-		Synpcc7942_0789	0.67	-0.7
785,081	+		Synpcc7942_0789	0.73	+1.1
785,081	+		Synpcc7942_0789	0.73	+0.7
785,144	-				-0.0
785,148	-				+0.6
785,152	+				+0.7
785,152	+				+0.7
785,158	-				+1.0
785,165	+				+0.7
785,166	-				+1.0
785,264	-				-0.6
785,264	-				+0.1
785,264	-				+0.4
785,291	+				+2.8
785,378	-	rbp3	Synpcc7942_0790	0.22	+2.6
785,378	-	rbp3	Synpcc7942_0790	0.22	+3.3
785,501	+	rbp3	Synpcc7942_0790	0.51	+3.6
785,509	-	rbp3	Synpcc7942_0790	0.53	+2.6
785,563	-	rbp3	Synpcc7942_0790	0.66	+3.8
785,563	-	rbp3	Synpcc7942_0790	0.66	+2.3
785,580	-	rbp3	Synpcc7942_0790	0.69	+2.9
785,662	-	rbp3	Synpcc7942_0790	0.89	+3.2
785,665	+	rbp3	Synpcc7942_0790	0.89	+2.5
785,665	+	rbp3	Synpcc7942_0790	0.89	+3.0
785,665	+	rbp3	Synpcc7942_0790	0.89	+1.8
785,665	+	rbp3	Synpcc7942_0790	0.89	+2.8
785,673	-				+3.1
785,673	-				+2.2
785,673	-				+3.7
785,673	-				+2.4
785,720	-				+1.3
785,738	+				+2.2
785,746	-				+1.5
785,772	+				+2.1
785,824	-				+2.3
785,860	+				+2.8
785,870	+				+2.7
785,888	-				+3.1
785,895	+				+2.2
785,895	+				+1.5
785,907	+				+0.4
785,908	+				+2.5
785,908	+				+2.0
785,908	+				+2.8
785,915	+				+5.6
785,947	+				-0.9
785,952	+				+0.8
785,952	+				+1.5
785,952	+				+1.6
785,975	+				-1.7
785,981	-				+1.1
786,001	-				+0.4
786,001	-				-1.4