Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0095

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
92,560	+				-2.2
92,578	-				-1.1
92,578	-				-0.9
92,588	-				-1.0
92,588	-				-1.6
92,588	-				-2.5
92,620	+				-2.5
92,646	+				-1.9
92,732	-	rpaA	Synpcc7942_0095	0.19	+1.0
92,810	-	rpaA	Synpcc7942_0095	0.29	-0.0
92,870	+	rpaA	Synpcc7942_0095	0.37	-3.3
92,899	-	rpaA	Synpcc7942_0095	0.41	-3.4
92,899	-	rpaA	Synpcc7942_0095	0.41	-2.3
92,922	-	rpaA	Synpcc7942_0095	0.44	-1.0
93,015	-	rpaA	Synpcc7942_0095	0.57	-0.0
93,065	+	rpaA	Synpcc7942_0095	0.63	-0.0
93,065	+	rpaA	Synpcc7942_0095	0.63	-2.3
93,065	+	rpaA	Synpcc7942_0095	0.63	-2.2
93,066	-	rpaA	Synpcc7942_0095	0.63	-2.3
93,073	-	rpaA	Synpcc7942_0095	0.64	-2.2
93,146	-	rpaA	Synpcc7942_0095	0.74	-0.9
93,148	-				+0.4
93,215	+	rpaA	Synpcc7942_0095	0.83	-0.0
93,220	+	rpaA	Synpcc7942_0095	0.84	-1.3
93,223	-	rpaA	Synpcc7942_0095	0.84	-3.0
93,228	+	rpaA	Synpcc7942_0095	0.85	-2.1
93,236	-	rpaA	Synpcc7942_0095	0.86	-3.6
93,258	-	rpaA	Synpcc7942_0095	0.89	-0.5
93,291	+				-2.2
93,349	-				-2.7
93,378	-				-0.0
93,414	+				-1.8
93,456	+				-3.1
93,456	+				-1.7
93,461	+				-2.7
93,461	+				-1.3
93,461	+				+0.2
93,461	+				-2.8
93,464	-				-2.3
93,466	+				-3.5
93,469	-				-3.0
93,469	-				-3.7
93,539	+				+1.1
93,552	-				+0.6
93,594	+				-0.0
93,599	+				+0.4
93,599	+				+1.4
93,604	+				+0.5
93,607	-				-2.0
93,650	+				+1.0
93,663	+				-1.3
93,687	-				-0.1
93,697	-				-0.1
93,697	-				+0.2
93,737	+				-0.2
93,737	+				+1.8
93,778	+				-1.7
93,779	+				+0.6
93,779	+				-0.6
93,787	-				-0.8
93,811	-				-2.0
93,813	+				+0.8
93,813	+				-1.2
93,821	-		Synpcc7942_0096	0.11	+0.5
93,821	-		Synpcc7942_0096	0.11	-4.3
93,839	+		Synpcc7942_0096	0.14	-0.1
93,901	+		Synpcc7942_0096	0.26	+0.3
93,901	+		Synpcc7942_0096	0.26	+0.3
93,901	+		Synpcc7942_0096	0.26	-0.6
93,922	+		Synpcc7942_0096	0.30	-1.6
93,932	+		Synpcc7942_0096	0.32	-0.2
93,963	-		Synpcc7942_0096	0.38	+1.1
94,009	-		Synpcc7942_0096	0.47	+0.4
94,011	+		Synpcc7942_0096	0.47	-1.2
94,018	+		Synpcc7942_0096	0.49	+0.5
94,027	+		Synpcc7942_0096	0.50	+1.7
94,027	+		Synpcc7942_0096	0.50	-0.0
94,027	+		Synpcc7942_0096	0.50	+0.1
94,027	+		Synpcc7942_0096	0.50	+0.1
94,027	+		Synpcc7942_0096	0.50	+0.6
94,032	+		Synpcc7942_0096	0.51	+1.3
94,083	-		Synpcc7942_0096	0.61	-1.1
94,153	+		Synpcc7942_0096	0.75	-1.5