Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09200

Experiment: R2A with Zinc chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Zinc chloride 0.625 mM
2,014,477	+				+0.2
2,014,477	+				-0.7
2,014,477	+				-0.3
2,014,477	+				+1.0
2,014,477	+				+0.2
2,014,477	+				+0.0
2,014,477	+				-0.4
2,014,477	+				-1.1
2,014,477	+				+0.2
2,014,477	+				-0.3
2,014,477	+				-0.7
2,014,477	+				-1.4
2,014,477	+				-1.2
2,014,477	+				-0.2
2,014,477	+				+0.8
2,014,477	+				+1.4
2,014,477	+				-0.7
2,014,477	+				-0.4
2,014,477	+				-0.2
2,014,477	+				-1.9
2,014,477	+				-0.1
2,014,477	+				-0.6
2,014,477	+				+1.6
2,014,477	+				+0.3
2,014,477	+				+0.6
2,014,477	+				-0.3
2,014,478	-				-0.1
2,014,478	-				+0.4
2,014,478	-				-1.6
2,014,478	-				+1.2
2,014,478	-				+0.2
2,014,478	-				-0.0
2,014,478	-				-0.5
2,014,478	-				-0.0
2,014,478	-				+0.1
2,014,478	-				+0.3
2,014,478	-				+0.1
2,014,478	-				+0.1
2,014,478	-				-0.2
2,014,478	-				-0.2
2,014,478	-				+0.1
2,014,478	-				-1.0
2,014,478	-				+0.6
2,014,478	-				-0.1
2,014,478	-				-0.9
2,014,478	-				+0.2
2,014,478	-				-1.9
2,014,478	-				+0.8
2,014,536	+				-1.6
2,014,536	+				+0.0
2,014,536	+				+0.9
2,014,536	+				-0.2
2,014,536	+				-2.4
2,014,536	+				-1.9
2,014,536	+				-1.1
2,014,536	+				+0.1
2,014,536	+				+0.3
2,014,536	+				+0.8
2,014,536	+				-0.2
2,014,536	+				+0.3
2,014,536	+				+2.4
2,014,536	+				-0.9
2,014,536	+				+0.2
2,014,536	+				-0.5
2,014,536	+				+0.2
2,014,536	+				+0.3
2,014,536	+				-0.1
2,014,536	+				+1.2
2,014,536	+				-0.2
2,014,536	+				-0.2
2,014,536	+				+1.0
2,014,536	+				-1.5
2,014,536	+				-0.5
2,014,536	+				-0.5
2,014,536	+				+1.2
2,014,536	+				+0.9
2,014,536	+				-0.4
2,014,536	+				-1.6
2,014,536	+				+0.1
2,014,536	+				+0.1
2,014,536	+				-0.3
2,014,536	+				+0.4
2,014,536	+				+0.4
2,014,536	+				+0.2
2,014,536	+				-0.6
2,014,536	+				-0.2
2,014,536	+				-0.8
2,014,536	+				+0.8
2,014,536	+				+0.1
2,014,536	+				+0.2
2,014,536	+				-0.8
2,014,536	+				+1.3
2,014,537	-				+0.4
2,014,537	-				+0.1
2,014,537	-				-0.5
2,014,537	-				-0.4
2,014,537	-				+1.0
2,014,537	-				-0.8
2,014,537	-				+0.4
2,014,537	-				-0.2
2,014,537	-				-0.8
2,014,537	-				+1.2
2,014,537	-				-1.5
2,014,537	-				-0.8
2,014,537	-				-0.2
2,014,537	-				-0.8
2,014,537	-				-0.4
2,014,537	-				-0.2
2,014,537	-				-1.3
2,014,537	-				-0.7
2,014,537	-				-0.5
2,014,537	-				-0.1
2,014,537	-				+0.6
2,014,537	-				+0.3
2,014,537	-				+0.1
2,014,537	-				-0.5
2,014,537	-				-0.2
2,014,537	-				-0.4
2,014,537	-				-0.2
2,014,537	-				-0.0
2,014,537	-				-0.2
2,014,537	-				-0.8
2,014,537	-				+1.0
2,014,537	-				+0.2
2,014,537	-				+0.9
2,014,537	-				-1.1
2,014,537	-				-0.0
2,014,537	-				-0.5
2,014,537	-				-1.0
2,014,537	-				-0.0
2,014,537	-				-0.7
2,014,537	-				+1.2
2,014,537	-				+1.6
2,014,537	-				-0.5
2,014,537	-				-0.6
2,014,537	-				-0.0
2,014,537	-				+0.9
2,014,537	-				+0.9
2,014,537	-				+0.2
2,014,537	-				+1.0
2,014,537	-				-0.5
2,014,537	-				-0.2
2,014,537	-				-0.1
2,014,537	-				+0.8
2,014,733	+		LRK54_RS09195	0.22	+0.1
2,014,733	+		LRK54_RS09195	0.22	+2.4
2,014,733	+		LRK54_RS09195	0.22	+1.5
2,014,733	+		LRK54_RS09195	0.22	+0.2
2,014,733	+		LRK54_RS09195	0.22	+0.8
2,014,733	+		LRK54_RS09195	0.22	+1.5
2,014,734	-		LRK54_RS09195	0.22	-1.5
2,014,734	-		LRK54_RS09195	0.22	+0.8
2,014,734	-		LRK54_RS09195	0.22	-0.9
2,014,734	-		LRK54_RS09195	0.22	-1.0
2,014,734	-		LRK54_RS09195	0.22	-0.1
2,014,760	+		LRK54_RS09195	0.25	-0.5
2,014,760	+		LRK54_RS09195	0.25	+0.1
2,014,760	+		LRK54_RS09195	0.25	+0.1
2,014,760	+		LRK54_RS09195	0.25	+0.6
2,014,760	+		LRK54_RS09195	0.25	-0.2
2,014,760	+		LRK54_RS09195	0.25	+0.1
2,014,760	+		LRK54_RS09195	0.25	-0.5
2,014,761	-		LRK54_RS09195	0.25	-0.9
2,014,761	-		LRK54_RS09195	0.25	+0.1
2,014,761	-		LRK54_RS09195	0.25	-0.7
2,014,761	-		LRK54_RS09195	0.25	+0.8
2,014,761	-		LRK54_RS09195	0.25	-0.1
2,014,761	-		LRK54_RS09195	0.25	+0.3
2,014,761	-		LRK54_RS09195	0.25	-0.2
2,014,778	+		LRK54_RS09195	0.28	-1.5
2,014,778	+		LRK54_RS09195	0.28	-1.2
2,014,778	+		LRK54_RS09195	0.28	+1.1
2,014,778	+		LRK54_RS09195	0.28	+0.4
2,014,778	+		LRK54_RS09195	0.28	-0.6
2,014,778	+		LRK54_RS09195	0.28	+0.9
2,014,778	+		LRK54_RS09195	0.28	+3.4
2,014,778	+		LRK54_RS09195	0.28	-0.7
2,014,778	+		LRK54_RS09195	0.28	-1.6
2,014,778	+		LRK54_RS09195	0.28	+0.9
2,014,778	+		LRK54_RS09195	0.28	-0.1
2,014,778	+		LRK54_RS09195	0.28	-0.1
2,014,778	+		LRK54_RS09195	0.28	+0.3
2,014,778	+		LRK54_RS09195	0.28	-0.2
2,014,778	+		LRK54_RS09195	0.28	+2.4
2,014,778	+		LRK54_RS09195	0.28	+0.4
2,014,778	+		LRK54_RS09195	0.28	+0.7
2,014,778	+		LRK54_RS09195	0.28	+1.1
2,014,778	+		LRK54_RS09195	0.28	+1.8
2,014,778	+		LRK54_RS09195	0.28	-0.3
2,014,778	+		LRK54_RS09195	0.28	-0.7
2,014,778	+		LRK54_RS09195	0.28	+0.3
2,014,778	+		LRK54_RS09195	0.28	-1.6
2,014,778	+		LRK54_RS09195	0.28	+0.2
2,014,778	+		LRK54_RS09195	0.28	+0.1
2,014,779	-		LRK54_RS09195	0.28	+1.1
2,014,779	-		LRK54_RS09195	0.28	-0.5
2,014,779	-		LRK54_RS09195	0.28	-0.5
2,014,779	-		LRK54_RS09195	0.28	+0.2
2,014,779	-		LRK54_RS09195	0.28	+0.1
2,014,779	-		LRK54_RS09195	0.28	-0.2
2,014,779	-		LRK54_RS09195	0.28	-1.1
2,014,779	-		LRK54_RS09195	0.28	+1.2
2,014,779	-		LRK54_RS09195	0.28	+0.4
2,014,779	-		LRK54_RS09195	0.28	-0.2
2,014,779	-		LRK54_RS09195	0.28	-1.2
2,014,779	-		LRK54_RS09195	0.28	+0.5
2,014,779	-		LRK54_RS09195	0.28	-0.4
2,014,779	-		LRK54_RS09195	0.28	-1.9
2,014,779	-		LRK54_RS09195	0.28	+0.7
2,014,779	-		LRK54_RS09195	0.28	+0.1
2,014,779	-		LRK54_RS09195	0.28	+0.3
2,014,779	-		LRK54_RS09195	0.28	+0.6
2,014,779	-		LRK54_RS09195	0.28	-0.8
2,014,779	-		LRK54_RS09195	0.28	-0.1
2,014,779	-		LRK54_RS09195	0.28	+0.2
2,014,779	-		LRK54_RS09195	0.28	-0.5
2,014,779	-		LRK54_RS09195	0.28	-0.3
2,014,779	-		LRK54_RS09195	0.28	-0.6
2,014,779	-		LRK54_RS09195	0.28	+0.4
2,014,847	+		LRK54_RS09195	0.37	+1.8
2,014,847	+		LRK54_RS09195	0.37	+2.0
2,014,847	+		LRK54_RS09195	0.37	+0.1
2,014,847	+		LRK54_RS09195	0.37	-0.4
2,014,848	-		LRK54_RS09195	0.37	-0.6
2,014,848	-		LRK54_RS09195	0.37	-1.2
2,014,848	-		LRK54_RS09195	0.37	+0.2
2,014,848	-		LRK54_RS09195	0.37	-1.9
2,014,848	-		LRK54_RS09195	0.37	-0.9
2,014,889	+		LRK54_RS09195	0.42	+0.2
2,014,889	+		LRK54_RS09195	0.42	-1.4
2,014,889	+		LRK54_RS09195	0.42	-0.5
2,014,889	+		LRK54_RS09195	0.42	+1.2
2,014,889	+		LRK54_RS09195	0.42	-0.2
2,014,889	+		LRK54_RS09195	0.42	-0.4
2,014,889	+		LRK54_RS09195	0.42	-2.1
2,014,889	+		LRK54_RS09195	0.42	-1.1
2,014,889	+		LRK54_RS09195	0.42	+2.8
2,014,889	+		LRK54_RS09195	0.42	-0.7
2,014,889	+		LRK54_RS09195	0.42	+0.5
2,014,889	+		LRK54_RS09195	0.42	+0.2
2,014,889	+		LRK54_RS09195	0.42	+0.2
2,014,889	+		LRK54_RS09195	0.42	-2.0
2,014,889	+		LRK54_RS09195	0.42	-0.6
2,014,889	+		LRK54_RS09195	0.42	+1.8
2,014,889	+		LRK54_RS09195	0.42	+1.1
2,014,890	-		LRK54_RS09195	0.42	-0.4
2,014,890	-		LRK54_RS09195	0.42	+0.7
2,014,890	-		LRK54_RS09195	0.42	+1.0
2,014,890	-		LRK54_RS09195	0.42	-1.0
2,014,890	-		LRK54_RS09195	0.42	-1.4
2,014,890	-		LRK54_RS09195	0.42	-0.6
2,014,890	-		LRK54_RS09195	0.42	-0.3
2,014,890	-		LRK54_RS09195	0.42	+0.8
2,014,890	-		LRK54_RS09195	0.42	+0.4
2,014,890	-		LRK54_RS09195	0.42	-1.7
2,014,890	-		LRK54_RS09195	0.42	+0.2
2,014,994	+		LRK54_RS09195	0.56	-0.7
2,014,994	+		LRK54_RS09195	0.56	+0.4
2,014,994	+		LRK54_RS09195	0.56	-0.8
2,014,994	+		LRK54_RS09195	0.56	-0.1
2,014,994	+		LRK54_RS09195	0.56	-0.6
2,014,994	+		LRK54_RS09195	0.56	-1.5
2,014,994	+		LRK54_RS09195	0.56	+0.3
2,014,994	+		LRK54_RS09195	0.56	-1.6
2,014,995	-		LRK54_RS09195	0.56	+0.3
2,014,995	-		LRK54_RS09195	0.56	-1.1
2,014,995	-		LRK54_RS09195	0.56	+0.3
2,014,995	-		LRK54_RS09195	0.56	-0.7
2,014,995	-		LRK54_RS09195	0.56	-1.3
2,014,995	-		LRK54_RS09195	0.56	+0.2
2,014,995	-		LRK54_RS09195	0.56	-0.5
2,015,168	+		LRK54_RS09195	0.78	+0.1
2,015,168	+		LRK54_RS09195	0.78	-0.4
2,015,168	+		LRK54_RS09195	0.78	+0.9
2,015,168	+		LRK54_RS09195	0.78	-0.9
2,015,168	+		LRK54_RS09195	0.78	-0.5
2,015,168	+		LRK54_RS09195	0.78	+1.8
2,015,169	-		LRK54_RS09195	0.78	-0.4
2,015,169	-		LRK54_RS09195	0.78	-0.2
2,015,169	-		LRK54_RS09195	0.78	-0.7
2,015,169	-		LRK54_RS09195	0.78	+0.7
2,015,169	-		LRK54_RS09195	0.78	+0.3
2,015,169	-		LRK54_RS09195	0.78	+1.1
2,015,169	-		LRK54_RS09195	0.78	+2.5
2,015,169	-		LRK54_RS09195	0.78	+0.7
2,015,169	-		LRK54_RS09195	0.78	-0.1
2,015,169	-		LRK54_RS09195	0.78	-0.7
2,015,169	-		LRK54_RS09195	0.78	-0.8
2,015,169	-		LRK54_RS09195	0.78	-1.3
2,015,228	+		LRK54_RS09195	0.86	-0.3
2,015,228	+		LRK54_RS09195	0.86	+0.0
2,015,229	-		LRK54_RS09195	0.86	-0.4
2,015,229	-		LRK54_RS09195	0.86	+0.4
2,015,279	+				-1.0
2,015,279	+				-0.4
2,015,279	+				-0.0
2,015,280	-				-1.3
2,015,280	-				+0.6
2,015,280	-				-2.3
2,015,280	-				+0.2
2,015,312	+				+0.1
2,015,312	+				+0.2
2,015,312	+				-0.2
2,015,312	+				-1.9
2,015,312	+				+0.7
2,015,312	+				-0.1
2,015,312	+				+1.7
2,015,312	+				+0.4
2,015,312	+				+0.2
2,015,312	+				+2.4
2,015,312	+				+0.8
2,015,312	+				+0.1
2,015,312	+				+0.1
2,015,313	-				-0.7
2,015,313	-				+0.1
2,015,313	-				-0.9
2,015,313	-				-0.7
2,015,313	-				-1.0
2,015,313	-				-2.2
2,015,313	-				-2.3
2,015,313	-				+0.4
2,015,313	-				+0.0
2,015,313	-				+0.1
2,015,324	+				+0.2
2,015,324	+				+0.4
2,015,324	+				+0.5
2,015,324	+				-1.7
2,015,324	+				+1.6
2,015,324	+				+0.1
2,015,324	+				+1.2
2,015,324	+				+0.3
2,015,325	-				+0.5
2,015,325	-				-0.2
2,015,325	-				-2.0
2,015,365	+				-0.3
2,015,365	+				-0.1
2,015,365	+				-1.0
2,015,365	+				-0.1
2,015,365	+				+0.3
2,015,365	+				+0.4
2,015,366	-				+0.4
2,015,460	+		LRK54_RS09200	0.10	-2.7
2,015,460	+		LRK54_RS09200	0.10	+0.8
2,015,460	+		LRK54_RS09200	0.10	-1.2
2,015,460	+		LRK54_RS09200	0.10	-0.2
2,015,461	-		LRK54_RS09200	0.10	+0.1
2,015,461	-		LRK54_RS09200	0.10	-1.2
2,015,461	-		LRK54_RS09200	0.10	-0.4
2,015,461	-		LRK54_RS09200	0.10	-1.0
2,015,526	+		LRK54_RS09200	0.15	-0.3
2,015,526	+		LRK54_RS09200	0.15	+0.1
2,015,526	+		LRK54_RS09200	0.15	+0.7
2,015,526	+		LRK54_RS09200	0.15	-2.2
2,015,526	+		LRK54_RS09200	0.15	-2.0
2,015,526	+		LRK54_RS09200	0.15	+0.4
2,015,526	+		LRK54_RS09200	0.15	-0.4
2,015,526	+		LRK54_RS09200	0.15	+1.6
2,015,526	+		LRK54_RS09200	0.15	+1.2
2,015,526	+		LRK54_RS09200	0.15	-0.4
2,015,526	+		LRK54_RS09200	0.15	-1.5
2,015,526	+		LRK54_RS09200	0.15	-1.3
2,015,526	+		LRK54_RS09200	0.15	-2.6
2,015,526	+		LRK54_RS09200	0.15	+2.4
2,015,527	-		LRK54_RS09200	0.15	-2.2
2,015,527	-		LRK54_RS09200	0.15	-0.6
2,015,527	-		LRK54_RS09200	0.15	+0.2
2,015,527	-		LRK54_RS09200	0.15	-0.7
2,015,527	-		LRK54_RS09200	0.15	-0.8
2,015,527	-		LRK54_RS09200	0.15	-2.6
2,015,527	-		LRK54_RS09200	0.15	+0.4
2,015,527	-		LRK54_RS09200	0.15	-1.1
2,015,527	-		LRK54_RS09200	0.15	+0.4
2,015,527	-		LRK54_RS09200	0.15	-2.1
2,015,527	-		LRK54_RS09200	0.15	-2.8
2,015,527	-		LRK54_RS09200	0.15	-1.5
2,015,527	-		LRK54_RS09200	0.15	-2.7
2,015,527	-		LRK54_RS09200	0.15	-0.6
2,015,527	-		LRK54_RS09200	0.15	+1.6
2,015,671	+		LRK54_RS09200	0.26	-0.4
2,015,671	+		LRK54_RS09200	0.26	-2.3
2,015,672	-		LRK54_RS09200	0.26	-1.1
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2,015,672	-		LRK54_RS09200	0.26	-1.6
2,015,672	-		LRK54_RS09200	0.26	-3.1
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2,015,799	+		LRK54_RS09200	0.36	-2.8
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2,015,800	-		LRK54_RS09200	0.36	-2.3
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2,015,800	-		LRK54_RS09200	0.36	-2.1
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2,015,883	+		LRK54_RS09200	0.42	-2.1
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2,015,883	+		LRK54_RS09200	0.42	-1.1
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2,015,884	-		LRK54_RS09200	0.43	-1.8
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2,015,884	-		LRK54_RS09200	0.43	+1.1
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2,015,884	-		LRK54_RS09200	0.43	-1.1
2,015,884	-		LRK54_RS09200	0.43	-2.8
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2,015,959	+		LRK54_RS09200	0.48	-1.8
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2,015,959	+		LRK54_RS09200	0.48	-0.1
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2,016,174	+		LRK54_RS09200	0.65	-0.1
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2,016,174	+		LRK54_RS09200	0.65	-1.3
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2,016,175	-		LRK54_RS09200	0.65	-0.8
2,016,175	-		LRK54_RS09200	0.65	-0.4
2,016,175	-		LRK54_RS09200	0.65	-0.6
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2,016,175	-		LRK54_RS09200	0.65	-0.2
2,016,175	-		LRK54_RS09200	0.65	-1.9
2,016,291	+		LRK54_RS09200	0.74	+0.4
2,016,291	+		LRK54_RS09200	0.74	-1.1
2,016,291	+		LRK54_RS09200	0.74	+1.4
2,016,291	+		LRK54_RS09200	0.74	+0.8
2,016,291	+		LRK54_RS09200	0.74	-1.6
2,016,291	+		LRK54_RS09200	0.74	+1.4
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2,016,291	+		LRK54_RS09200	0.74	-0.9
2,016,291	+		LRK54_RS09200	0.74	+0.1
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2,016,291	+		LRK54_RS09200	0.74	-1.2
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2,016,292	-		LRK54_RS09200	0.74	-1.9
2,016,436	-		LRK54_RS09200	0.85	+0.4
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2,016,525	+				-2.1
2,016,525	+				-1.1
2,016,525	+				+0.4
2,016,525	+				-0.9
2,016,526	-				-1.6
2,016,526	-				-1.3
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2,016,636	+				-0.3
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2,016,636	+				+0.5
2,016,636	+				+0.4
2,016,636	+				-1.1
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2,016,636	+				-0.6
2,016,636	+				-1.6
2,016,636	+				-2.0
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2,016,636	+				-0.5
2,016,636	+				-0.7
2,016,636	+				+0.3
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2,016,636	+				-0.2
2,016,636	+				-0.8
2,016,636	+				-0.6
2,016,636	+				-0.7
2,016,636	+				-0.1
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2,016,636	+				+1.4
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2,016,636	+				-2.5
2,016,636	+				-1.1
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2,016,637	-				-1.1
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2,016,637	-				+0.7
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2,016,637	-				-0.4
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2,016,637	-				-0.6
2,016,637	-				-0.8
2,016,637	-				-0.1
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2,016,637	-				-1.4
2,016,637	-				-0.2
2,016,637	-				+0.7
2,016,637	-				-1.1
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2,016,637	-				-0.7
2,016,637	-				-0.8
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2,016,712	+				-2.2
2,016,712	+				-1.4
2,016,712	+				-1.1
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2,016,712	+				-1.5
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2,016,712	+				-1.1
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2,016,712	+				-1.7
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2,016,712	+				-0.3
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2,016,713	-				-2.1
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2,016,713	-				-0.0
2,016,713	-				-0.6
2,016,713	-				-1.5
2,016,713	-				-1.1
2,016,713	-				+1.0
2,016,713	-				-1.1
2,016,713	-				-1.8
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2,016,757	+				-1.2
2,016,757	+				+1.0
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2,016,757	+				+0.3
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2,016,757	+				+0.3
2,016,757	+				+0.5
2,016,757	+				-1.1
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2,016,757	+				+0.2
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2,016,758	-				+1.2
2,016,758	-				-2.1
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2,016,758	-				+1.2
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2,016,774	+				-1.3
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2,016,774	+				-0.6
2,016,774	+				+2.1
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2,016,775	-				+1.8
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2,016,874	+		LRK54_RS09205	0.32	-1.1
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2,016,875	-		LRK54_RS09205	0.32	-0.1
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