Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06585

Experiment: R2A with Zinc chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Zinc chloride 0.625 mM
1,415,327	+				+1.3
1,415,327	+				-0.7
1,415,327	+				-1.0
1,415,327	+				+0.2
1,415,328	-				-0.2
1,415,328	-				+1.3
1,415,328	-				-0.6
1,415,328	-				+0.7
1,415,498	+		LRK54_RS06585	0.41	-0.3
1,415,498	+		LRK54_RS06585	0.41	+0.2
1,415,498	+		LRK54_RS06585	0.41	-0.2
1,415,498	+		LRK54_RS06585	0.41	-0.5
1,415,498	+		LRK54_RS06585	0.41	-0.5
1,415,498	+		LRK54_RS06585	0.41	+1.2
1,415,498	+		LRK54_RS06585	0.41	-0.8
1,415,498	+		LRK54_RS06585	0.41	+0.2
1,415,498	+		LRK54_RS06585	0.41	-0.8
1,415,498	+		LRK54_RS06585	0.41	-2.4
1,415,498	+		LRK54_RS06585	0.41	-1.0
1,415,498	+		LRK54_RS06585	0.41	+0.2
1,415,498	+		LRK54_RS06585	0.41	+0.9
1,415,498	+		LRK54_RS06585	0.41	-2.1
1,415,498	+		LRK54_RS06585	0.41	-2.4
1,415,498	+		LRK54_RS06585	0.41	+1.7
1,415,498	+		LRK54_RS06585	0.41	-1.7
1,415,498	+		LRK54_RS06585	0.41	-0.5
1,415,498	+		LRK54_RS06585	0.41	-0.1
1,415,498	+		LRK54_RS06585	0.41	-1.8
1,415,498	+		LRK54_RS06585	0.41	-0.8
1,415,498	+		LRK54_RS06585	0.41	-0.7
1,415,498	+		LRK54_RS06585	0.41	-0.4
1,415,498	+		LRK54_RS06585	0.41	+1.1
1,415,498	+		LRK54_RS06585	0.41	-2.0
1,415,498	+		LRK54_RS06585	0.41	+2.3
1,415,498	+		LRK54_RS06585	0.41	-1.5
1,415,498	+		LRK54_RS06585	0.41	-0.1
1,415,498	+		LRK54_RS06585	0.41	-1.1
1,415,498	+		LRK54_RS06585	0.41	-0.2
1,415,498	+		LRK54_RS06585	0.41	-0.8
1,415,498	+		LRK54_RS06585	0.41	+0.0
1,415,498	+		LRK54_RS06585	0.41	+0.7
1,415,498	+		LRK54_RS06585	0.41	+0.3
1,415,498	+		LRK54_RS06585	0.41	-0.9
1,415,499	-		LRK54_RS06585	0.41	-2.2
1,415,499	-		LRK54_RS06585	0.41	-1.3
1,415,499	-		LRK54_RS06585	0.41	+0.0
1,415,499	-		LRK54_RS06585	0.41	-0.5
1,415,499	-		LRK54_RS06585	0.41	-1.1
1,415,499	-		LRK54_RS06585	0.41	-0.7
1,415,499	-		LRK54_RS06585	0.41	-2.5
1,415,499	-		LRK54_RS06585	0.41	+0.3
1,415,499	-		LRK54_RS06585	0.41	+0.3
1,415,499	-		LRK54_RS06585	0.41	-0.2
1,415,499	-		LRK54_RS06585	0.41	-2.5
1,415,499	-		LRK54_RS06585	0.41	-2.1
1,415,499	-		LRK54_RS06585	0.41	+0.2
1,415,499	-		LRK54_RS06585	0.41	-0.6
1,415,499	-		LRK54_RS06585	0.41	-1.1
1,415,499	-		LRK54_RS06585	0.41	-0.3
1,415,499	-		LRK54_RS06585	0.41	-0.9
1,415,499	-		LRK54_RS06585	0.41	-1.0
1,415,499	-		LRK54_RS06585	0.41	-0.5
1,415,499	-		LRK54_RS06585	0.41	-0.5
1,415,499	-		LRK54_RS06585	0.41	-1.9
1,415,499	-		LRK54_RS06585	0.41	-0.5
1,415,499	-		LRK54_RS06585	0.41	-1.4
1,415,499	-		LRK54_RS06585	0.41	-0.9
1,415,499	-		LRK54_RS06585	0.41	+0.5
1,415,499	-		LRK54_RS06585	0.41	-1.5
1,415,499	-		LRK54_RS06585	0.41	-0.0
1,415,499	-		LRK54_RS06585	0.41	-0.5
1,415,499	-		LRK54_RS06585	0.41	-0.8
1,415,499	-		LRK54_RS06585	0.41	+1.7
1,415,499	-		LRK54_RS06585	0.41	-0.1
1,415,499	-		LRK54_RS06585	0.41	+0.1
1,415,549	+		LRK54_RS06585	0.53	-1.9
1,415,549	+		LRK54_RS06585	0.53	-1.6
1,415,549	+		LRK54_RS06585	0.53	-0.7
1,415,549	+		LRK54_RS06585	0.53	-2.8
1,415,550	-		LRK54_RS06585	0.53	-1.9
1,415,550	-		LRK54_RS06585	0.53	-1.4
1,415,550	-		LRK54_RS06585	0.53	-1.5
1,415,550	-		LRK54_RS06585	0.53	-1.0
1,415,550	-		LRK54_RS06585	0.53	-1.7
1,415,630	+		LRK54_RS06585	0.72	-1.1
1,415,630	+		LRK54_RS06585	0.72	-0.7
1,415,630	+		LRK54_RS06585	0.72	-0.1
1,415,630	+		LRK54_RS06585	0.72	+0.6
1,415,630	+		LRK54_RS06585	0.72	-2.1
1,415,630	+		LRK54_RS06585	0.72	+0.1
1,415,630	+		LRK54_RS06585	0.72	-1.7
1,415,630	+		LRK54_RS06585	0.72	+0.0
1,415,630	+		LRK54_RS06585	0.72	-0.5
1,415,630	+		LRK54_RS06585	0.72	-0.5
1,415,630	+		LRK54_RS06585	0.72	-0.8
1,415,630	+		LRK54_RS06585	0.72	-2.3
1,415,630	+		LRK54_RS06585	0.72	-0.6
1,415,630	+		LRK54_RS06585	0.72	-0.9
1,415,630	+		LRK54_RS06585	0.72	-1.6
1,415,630	+		LRK54_RS06585	0.72	+0.2
1,415,630	+		LRK54_RS06585	0.72	-1.0
1,415,630	+		LRK54_RS06585	0.72	-1.4
1,415,630	+		LRK54_RS06585	0.72	-1.5
1,415,630	+		LRK54_RS06585	0.72	-0.1
1,415,630	+		LRK54_RS06585	0.72	-1.5
1,415,630	+		LRK54_RS06585	0.72	-0.7
1,415,630	+		LRK54_RS06585	0.72	-0.3
1,415,630	+		LRK54_RS06585	0.72	+0.3
1,415,630	+		LRK54_RS06585	0.72	-2.1
1,415,630	+		LRK54_RS06585	0.72	-2.8
1,415,630	+		LRK54_RS06585	0.72	-0.5
1,415,631	-		LRK54_RS06585	0.73	-1.9
1,415,631	-		LRK54_RS06585	0.73	-1.8
1,415,631	-		LRK54_RS06585	0.73	+0.2
1,415,631	-		LRK54_RS06585	0.73	-0.9
1,415,631	-		LRK54_RS06585	0.73	-0.5
1,415,631	-		LRK54_RS06585	0.73	-0.8
1,415,631	-		LRK54_RS06585	0.73	+1.5
1,415,631	-		LRK54_RS06585	0.73	+1.4
1,415,631	-		LRK54_RS06585	0.73	+0.2
1,415,631	-		LRK54_RS06585	0.73	+0.9
1,415,631	-		LRK54_RS06585	0.73	+0.5
1,415,631	-		LRK54_RS06585	0.73	-0.8
1,415,631	-		LRK54_RS06585	0.73	-1.7
1,415,687	+		LRK54_RS06585	0.86	-0.1
1,415,687	+		LRK54_RS06585	0.86	-0.9
1,415,688	-		LRK54_RS06585	0.86	-1.7
1,415,738	+				-0.5
1,415,738	+				-1.1
1,415,738	+				-0.8
1,415,738	+				-2.4
1,415,738	+				-0.3
1,415,738	+				-0.7
1,415,738	+				-1.4
1,415,738	+				-2.3
1,415,738	+				-1.8
1,415,738	+				-0.7
1,415,738	+				-0.6
1,415,738	+				-1.5
1,415,738	+				-2.8
1,415,739	-				-1.8
1,415,739	-				-0.9
1,415,739	-				+0.9
1,415,739	-				-2.4
1,415,739	-				-2.8
1,415,739	-				-1.0
1,415,739	-				-1.2
1,415,739	-				-1.3
1,415,739	-				-0.5
1,415,739	-				-2.4
1,415,739	-				-0.7
1,415,739	-				-0.9
1,415,739	-				-0.7
1,415,739	-				-0.9
1,415,739	-				-1.9
1,415,739	-				+1.1
1,415,739	-				-1.0
1,415,739	-				+0.2
1,415,739	-				-1.0
1,415,739	-				-0.4
1,415,739	-				-1.3
1,415,749	-				+1.3
1,415,942	+		LRK54_RS06590	0.14	+0.2
1,415,942	+		LRK54_RS06590	0.14	-2.1
1,415,942	+		LRK54_RS06590	0.14	+1.1
1,415,942	+		LRK54_RS06590	0.14	+1.0
1,415,942	+		LRK54_RS06590	0.14	-1.1
1,415,942	+		LRK54_RS06590	0.14	+0.0
1,415,942	+		LRK54_RS06590	0.14	-0.8
1,415,942	+		LRK54_RS06590	0.14	+0.3
1,415,942	+		LRK54_RS06590	0.14	+0.0
1,415,942	+		LRK54_RS06590	0.14	-1.7
1,415,942	+		LRK54_RS06590	0.14	+0.1
1,415,942	+		LRK54_RS06590	0.14	+1.3
1,415,942	+		LRK54_RS06590	0.14	-1.5
1,415,942	+		LRK54_RS06590	0.14	-0.4
1,415,942	+		LRK54_RS06590	0.14	-1.6
1,415,942	+		LRK54_RS06590	0.14	-2.0
1,415,942	+		LRK54_RS06590	0.14	-0.7
1,415,942	+		LRK54_RS06590	0.14	-1.9
1,415,942	+		LRK54_RS06590	0.14	-2.6
1,415,942	+		LRK54_RS06590	0.14	+0.9
1,415,942	+		LRK54_RS06590	0.14	+0.0
1,415,942	+		LRK54_RS06590	0.14	-1.6
1,415,942	+		LRK54_RS06590	0.14	-1.0
1,415,942	+		LRK54_RS06590	0.14	-0.3
1,415,942	+		LRK54_RS06590	0.14	-0.2
1,415,942	+		LRK54_RS06590	0.14	-1.0
1,415,942	+		LRK54_RS06590	0.14	-1.1
1,415,942	+		LRK54_RS06590	0.14	-0.8
1,415,942	+		LRK54_RS06590	0.14	-0.7
1,415,942	+		LRK54_RS06590	0.14	-1.5
1,415,942	+		LRK54_RS06590	0.14	+0.3
1,415,942	+		LRK54_RS06590	0.14	-0.5
1,415,942	+		LRK54_RS06590	0.14	+0.5
1,415,942	+		LRK54_RS06590	0.14	-0.5
1,415,942	+		LRK54_RS06590	0.14	-0.1
1,415,942	+		LRK54_RS06590	0.14	-0.8
1,415,942	+		LRK54_RS06590	0.14	-1.3
1,415,942	+		LRK54_RS06590	0.14	-0.7
1,415,942	+		LRK54_RS06590	0.14	+0.5
1,415,942	+		LRK54_RS06590	0.14	-1.0
1,415,942	+		LRK54_RS06590	0.14	-0.1
1,415,942	+		LRK54_RS06590	0.14	-2.1
1,415,943	-		LRK54_RS06590	0.14	-1.0
1,415,943	-		LRK54_RS06590	0.14	+0.2
1,415,943	-		LRK54_RS06590	0.14	+1.7
1,415,943	-		LRK54_RS06590	0.14	-0.1
1,415,943	-		LRK54_RS06590	0.14	+1.3
1,415,943	-		LRK54_RS06590	0.14	+0.2
1,415,943	-		LRK54_RS06590	0.14	+0.6
1,415,943	-		LRK54_RS06590	0.14	+0.7
1,415,943	-		LRK54_RS06590	0.14	-1.8
1,415,943	-		LRK54_RS06590	0.14	+0.2
1,415,943	-		LRK54_RS06590	0.14	+1.1
1,415,943	-		LRK54_RS06590	0.14	+0.7
1,415,943	-		LRK54_RS06590	0.14	+0.1
1,415,943	-		LRK54_RS06590	0.14	+0.2
1,415,943	-		LRK54_RS06590	0.14	-0.2
1,415,943	-		LRK54_RS06590	0.14	+0.7
1,415,943	-		LRK54_RS06590	0.14	-0.2
1,415,943	-		LRK54_RS06590	0.14	+0.3
1,415,943	-		LRK54_RS06590	0.14	+2.1
1,415,943	-		LRK54_RS06590	0.14	-0.6
1,415,943	-		LRK54_RS06590	0.14	+0.7
1,415,943	-		LRK54_RS06590	0.14	-0.0
1,415,943	-		LRK54_RS06590	0.14	-1.5
1,415,943	-		LRK54_RS06590	0.14	-0.2
1,415,943	-		LRK54_RS06590	0.14	-1.6
1,415,943	-		LRK54_RS06590	0.14	-0.4
1,415,943	-		LRK54_RS06590	0.14	+0.3
1,415,943	-		LRK54_RS06590	0.14	-0.3
1,415,943	-		LRK54_RS06590	0.14	+0.2
1,416,158	+		LRK54_RS06590	0.32	-1.2
1,416,158	+		LRK54_RS06590	0.32	-0.4
1,416,158	+		LRK54_RS06590	0.32	-1.9
1,416,158	+		LRK54_RS06590	0.32	-1.8
1,416,158	+		LRK54_RS06590	0.32	-0.0
1,416,485	+		LRK54_RS06590	0.58	-1.0
1,416,512	+		LRK54_RS06590	0.60	+0.8
1,416,512	+		LRK54_RS06590	0.60	-1.7
1,416,513	-		LRK54_RS06590	0.61	-0.3
1,416,524	+		LRK54_RS06590	0.61	-0.7
1,416,524	+		LRK54_RS06590	0.61	-1.5
1,416,524	+		LRK54_RS06590	0.61	-0.4
1,416,524	+		LRK54_RS06590	0.61	-0.3
1,416,524	+		LRK54_RS06590	0.61	+0.0
1,416,524	+		LRK54_RS06590	0.61	+0.0
1,416,524	+		LRK54_RS06590	0.61	-0.7
1,416,524	+		LRK54_RS06590	0.61	-0.7
1,416,524	+		LRK54_RS06590	0.61	-1.5
1,416,524	+		LRK54_RS06590	0.61	-1.5
1,416,524	+		LRK54_RS06590	0.61	-0.5
1,416,525	-		LRK54_RS06590	0.62	-0.3
1,416,525	-		LRK54_RS06590	0.62	+0.0
1,416,525	-		LRK54_RS06590	0.62	+0.3
1,416,525	-		LRK54_RS06590	0.62	-0.3
1,416,525	-		LRK54_RS06590	0.62	+1.6
1,416,525	-		LRK54_RS06590	0.62	-1.7
1,416,525	-		LRK54_RS06590	0.62	-0.2
1,416,525	-		LRK54_RS06590	0.62	-1.3
1,416,525	-		LRK54_RS06590	0.62	-0.3
1,416,525	-		LRK54_RS06590	0.62	+0.1