Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS23670

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
5,781,711	+		CA265_RS23660	0.75	-0.5
5,781,712	-		CA265_RS23660	0.75	-0.8
5,781,716	+		CA265_RS23660	0.75	+1.5
5,781,755	+		CA265_RS23660	0.80	+0.1
5,781,856	+				-0.9
5,781,977	+				+1.1
5,782,011	+				+0.4
5,782,011	+				+0.1
5,782,012	-				-0.6
5,782,012	-				-3.1
5,782,013	+				-0.2
5,782,154	-		CA265_RS23665	0.27	-0.5
5,782,248	+		CA265_RS23665	0.45	-0.0
5,782,339	+		CA265_RS23665	0.62	+0.8
5,782,339	+		CA265_RS23665	0.62	-0.0
5,782,351	+		CA265_RS23665	0.64	-0.6
5,782,352	-		CA265_RS23665	0.64	-1.7
5,782,448	+		CA265_RS23665	0.82	-0.5
5,782,448	+		CA265_RS23665	0.82	-0.5
5,782,469	-		CA265_RS23665	0.86	-1.6
5,782,484	+		CA265_RS23665	0.89	+0.2
5,782,564	-				+0.2
5,782,613	+				+0.3
5,782,613	+				-0.2
5,782,614	-				-0.5
5,782,669	-				+0.9
5,782,694	-				-0.9
5,782,695	-				+0.5
5,782,709	+				-0.4
5,782,710	-				-0.3
5,782,729	-				+0.6
5,782,762	+		CA265_RS23670	0.12	-0.1
5,782,763	-		CA265_RS23670	0.12	+0.8
5,782,796	+		CA265_RS23670	0.18	-0.2
5,782,855	-		CA265_RS23670	0.28	+0.6
5,782,862	+		CA265_RS23670	0.29	-0.1
5,782,878	-		CA265_RS23670	0.32	+0.1
5,782,921	-		CA265_RS23670	0.39	+0.5
5,782,921	-		CA265_RS23670	0.39	+0.3
5,782,921	-		CA265_RS23670	0.39	-1.5
5,782,952	+		CA265_RS23670	0.44	+1.2
5,782,969	-		CA265_RS23670	0.47	+0.9
5,782,969	-		CA265_RS23670	0.47	+0.1
5,783,000	+		CA265_RS23670	0.52	-0.2
5,783,211	+		CA265_RS23670	0.88	+0.5
5,783,212	-		CA265_RS23670	0.88	+0.5
5,783,212	-		CA265_RS23670	0.88	-0.2
5,783,235	+				+0.4
5,783,235	+				+1.2
5,783,253	+				+0.2
5,783,280	-				+1.1
5,783,309	+		CA265_RS23675	0.11	-0.5
5,783,310	-		CA265_RS23675	0.11	+1.3
5,783,460	-				-0.7
5,783,502	-				+0.4
5,783,562	+				-0.3
5,783,563	-				-0.2
5,783,577	-				+0.3
5,783,585	+				+0.8
5,783,585	+				+0.1
5,783,586	-				-0.9
5,783,586	-				-0.5
5,783,589	+				+0.3
5,783,589	+				-0.1
5,783,629	+				-1.8
5,783,629	+				+0.7
5,783,630	-				-0.3
5,783,630	-				+1.5
5,783,700	-				-0.1
5,783,728	+				+0.1
5,783,805	+		CA265_RS23680	0.11	+0.4
5,783,806	-		CA265_RS23680	0.11	+0.3
5,783,809	+		CA265_RS23680	0.11	+0.8
5,783,809	+		CA265_RS23680	0.11	+0.8
5,783,809	+		CA265_RS23680	0.11	+0.3
5,783,809	+		CA265_RS23680	0.11	+2.5
5,783,810	-		CA265_RS23680	0.11	+0.3
5,783,810	-		CA265_RS23680	0.11	+0.9
5,783,821	-		CA265_RS23680	0.12	+1.3
5,783,832	+		CA265_RS23680	0.13	-0.7
5,783,833	-		CA265_RS23680	0.13	-0.0
5,783,854	-		CA265_RS23680	0.15	+0.9
5,783,907	+		CA265_RS23680	0.19	-0.4
5,783,907	+		CA265_RS23680	0.19	-0.1
5,783,910	-		CA265_RS23680	0.20	+0.3
5,783,915	+		CA265_RS23680	0.20	-0.5
5,783,967	+		CA265_RS23680	0.24	+0.8
5,783,983	+		CA265_RS23680	0.26	+1.1
5,784,008	+		CA265_RS23680	0.28	+0.8
5,784,008	+		CA265_RS23680	0.28	+0.4
5,784,071	-		CA265_RS23680	0.33	+0.1
5,784,074	+		CA265_RS23680	0.34	+0.8
5,784,074	+		CA265_RS23680	0.34	-0.7
5,784,074	+		CA265_RS23680	0.34	-0.0
5,784,075	-		CA265_RS23680	0.34	-0.3
5,784,075	-		CA265_RS23680	0.34	+0.1
5,784,075	-		CA265_RS23680	0.34	-0.3
5,784,096	-		CA265_RS23680	0.35	+0.9
5,784,261	-		CA265_RS23680	0.49	+0.2