Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16660

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
4,184,149	-		CA265_RS16655	0.14	+0.3
4,184,195	+		CA265_RS16655	0.18	+2.6
4,184,196	-		CA265_RS16655	0.18	+0.6
4,184,205	-		CA265_RS16655	0.19	+0.0
4,184,221	+		CA265_RS16655	0.20	-0.1
4,184,222	-		CA265_RS16655	0.20	-0.3
4,184,225	+		CA265_RS16655	0.20	-0.4
4,184,260	+		CA265_RS16655	0.23	-0.9
4,184,261	-		CA265_RS16655	0.24	-0.1
4,184,289	+		CA265_RS16655	0.26	+0.1
4,184,290	-		CA265_RS16655	0.26	+0.4
4,184,449	+		CA265_RS16655	0.40	+0.0
4,184,450	-		CA265_RS16655	0.41	-0.1
4,184,480	-		CA265_RS16655	0.43	-0.0
4,184,500	+		CA265_RS16655	0.45	-0.1
4,184,501	-		CA265_RS16655	0.45	-0.1
4,184,513	+		CA265_RS16655	0.46	+0.0
4,184,518	-		CA265_RS16655	0.47	-0.9
4,184,652	+		CA265_RS16655	0.59	-1.0
4,184,652	+		CA265_RS16655	0.59	-0.8
4,184,653	-		CA265_RS16655	0.59	-0.8
4,184,653	-		CA265_RS16655	0.59	-0.2
4,184,653	-		CA265_RS16655	0.59	+0.4
4,184,738	+		CA265_RS16655	0.66	-1.3
4,184,747	-		CA265_RS16655	0.67	+1.6
4,184,827	-		CA265_RS16655	0.74	-1.1
4,184,997	+		CA265_RS16655	0.90	-0.6
4,184,998	-		CA265_RS16655	0.90	-0.4
4,184,999	+		CA265_RS16655	0.90	-0.2
4,185,008	+				-0.9
4,185,047	-				-0.5
4,185,154	-		CA265_RS16660	0.14	+0.2
4,185,156	+		CA265_RS16660	0.15	-0.4
4,185,235	-		CA265_RS16660	0.43	+0.0
4,185,245	-		CA265_RS16660	0.46	-0.4
4,185,245	-		CA265_RS16660	0.46	-1.2
4,185,262	+		CA265_RS16660	0.52	-0.3
4,185,274	-		CA265_RS16660	0.56	-0.6
4,185,277	+		CA265_RS16660	0.58	-1.3
4,185,277	+		CA265_RS16660	0.58	-1.3
4,185,280	+		CA265_RS16660	0.59	-1.3
4,185,280	+		CA265_RS16660	0.59	-0.7
4,185,281	-		CA265_RS16660	0.59	+0.5
4,185,431	+				+0.4
4,185,516	+				-1.1
4,185,538	+				-0.3
4,185,634	+				+0.3
4,185,741	+		CA265_RS16665	0.27	+0.4
4,185,742	-		CA265_RS16665	0.27	-1.4
4,185,775	-		CA265_RS16665	0.36	-2.5
4,185,828	+		CA265_RS16665	0.48	-0.1
4,185,904	-		CA265_RS16665	0.67	+1.8
4,185,934	+		CA265_RS16665	0.74	+0.0
4,185,943	+		CA265_RS16665	0.76	-0.1
4,185,958	-		CA265_RS16665	0.80	+0.0
4,185,960	+		CA265_RS16665	0.81	+0.3
4,185,961	-		CA265_RS16665	0.81	+0.5
4,186,055	-				+0.4
4,186,110	+				-0.0
4,186,111	-				-0.7
4,186,153	+		CA265_RS16670	0.14	+0.6
4,186,189	-		CA265_RS16670	0.19	+0.1
4,186,193	+		CA265_RS16670	0.19	-0.3
4,186,223	+		CA265_RS16670	0.23	+0.3
4,186,224	-		CA265_RS16670	0.23	-0.3
4,186,237	-		CA265_RS16670	0.25	-0.2
4,186,345	-		CA265_RS16670	0.39	-0.1
4,186,346	+		CA265_RS16670	0.39	+0.4
4,186,346	+		CA265_RS16670	0.39	+0.4
4,186,347	-		CA265_RS16670	0.39	+0.6
4,186,362	+		CA265_RS16670	0.41	-0.3
4,186,369	+		CA265_RS16670	0.42	+0.4
4,186,370	-		CA265_RS16670	0.42	-0.4
4,186,370	-		CA265_RS16670	0.42	+0.1
4,186,374	+		CA265_RS16670	0.43	-1.5
4,186,374	+		CA265_RS16670	0.43	-0.4