Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13285

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
3,298,430	+				-1.7
3,298,573	+				-0.2
3,298,574	-				-1.1
3,298,583	+				-1.4
3,298,583	+				+1.1
3,298,587	+				+0.1
3,298,587	+				-0.2
3,298,588	-				+0.4
3,298,635	+				+0.0
3,298,635	+				-0.3
3,298,668	+				+3.2
3,298,669	-				-1.8
3,298,675	+				+0.5
3,298,682	+				-0.8
3,298,683	-				-0.9
3,298,698	-				-0.6
3,298,711	+				-0.8
3,298,757	-		CA265_RS13280	0.12	+0.6
3,298,799	+		CA265_RS13280	0.19	+0.5
3,298,799	+		CA265_RS13280	0.19	-1.0
3,298,800	-		CA265_RS13280	0.19	-1.8
3,298,800	-		CA265_RS13280	0.19	+0.5
3,298,800	-		CA265_RS13280	0.19	-0.7
3,298,986	+		CA265_RS13280	0.50	-0.9
3,298,988	+		CA265_RS13280	0.50	-0.5
3,298,989	-		CA265_RS13280	0.50	-0.7
3,298,989	-		CA265_RS13280	0.50	-0.1
3,299,103	+		CA265_RS13280	0.69	-2.2
3,299,129	-		CA265_RS13280	0.73	-0.6
3,299,144	+		CA265_RS13280	0.75	-2.4
3,299,144	+		CA265_RS13280	0.75	-0.5
3,299,145	-		CA265_RS13280	0.75	-0.4
3,299,145	-		CA265_RS13280	0.75	-0.3
3,299,145	-		CA265_RS13280	0.75	+1.1
3,299,149	-		CA265_RS13280	0.76	-0.2
3,299,158	-		CA265_RS13280	0.78	-0.1
3,299,281	-				-0.3
3,299,446	-		CA265_RS13285	0.10	-3.3
3,299,455	+		CA265_RS13285	0.11	-1.3
3,299,499	+		CA265_RS13285	0.14	-0.9
3,299,535	+		CA265_RS13285	0.17	-1.7
3,299,535	+		CA265_RS13285	0.17	-0.3
3,299,591	-		CA265_RS13285	0.21	-4.0
3,299,613	+		CA265_RS13285	0.22	-0.5
3,299,614	-		CA265_RS13285	0.22	-3.0
3,299,654	-		CA265_RS13285	0.25	-2.4
3,299,706	+		CA265_RS13285	0.29	-2.2
3,299,750	-		CA265_RS13285	0.32	-3.3
3,299,754	+		CA265_RS13285	0.33	-0.3
3,299,876	+		CA265_RS13285	0.41	-1.4
3,299,926	-		CA265_RS13285	0.45	-1.1
3,299,974	+		CA265_RS13285	0.49	-2.0
3,300,067	+		CA265_RS13285	0.55	-1.8
3,300,144	+		CA265_RS13285	0.61	-2.8
3,300,145	-		CA265_RS13285	0.61	-1.3
3,300,157	+		CA265_RS13285	0.62	-2.4
3,300,169	-		CA265_RS13285	0.63	-2.2
3,300,179	+		CA265_RS13285	0.63	-5.0
3,300,180	-		CA265_RS13285	0.64	-3.5
3,300,180	-		CA265_RS13285	0.64	-1.6
3,300,180	-		CA265_RS13285	0.64	-1.6
3,300,243	+		CA265_RS13285	0.68	-2.6
3,300,268	-		CA265_RS13285	0.70	-1.3
3,300,294	+		CA265_RS13285	0.72	-3.2
3,300,307	-		CA265_RS13285	0.73	-1.8
3,300,308	+		CA265_RS13285	0.73	-2.8
3,300,309	-		CA265_RS13285	0.73	+0.2
3,300,554	+				-1.0
3,300,555	-				-2.0
3,300,583	+				-1.4
3,300,583	+				-2.1
3,300,594	+				-1.2
3,300,620	-				-1.1
3,300,708	+				-2.6
3,300,708	+				-1.7
3,300,851	-				+0.6
3,300,874	-				-0.1
3,300,909	+				-0.2
3,300,909	+				-0.6
3,300,917	-				+0.9
3,300,961	+				+1.2
3,301,118	+				+0.1
3,301,124	+				-0.2
3,301,124	+				-0.0
3,301,124	+				+0.2
3,301,125	-				+0.4
3,301,229	-				-0.5
3,301,229	-				-0.1
3,301,229	-				-0.4
3,301,252	+				+0.2
3,301,253	-				+0.2
3,301,372	-				+0.4
3,301,382	-				-0.8
3,301,385	+				-1.2
3,301,385	+				+0.7
3,301,386	-				+0.0
3,301,386	-				-0.6
3,301,406	+				-0.1
3,301,474	-				-0.0
3,301,534	+		CA265_RS13295	0.11	+0.1
3,301,552	+		CA265_RS13295	0.12	+0.2
3,301,617	-		CA265_RS13295	0.15	-0.3
3,301,678	+		CA265_RS13295	0.17	-0.8
3,301,678	+		CA265_RS13295	0.17	+0.6