Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13275

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
3,296,241	+		CA265_RS13265	0.21	-0.2
3,296,262	-		CA265_RS13265	0.28	+0.6
3,296,264	+		CA265_RS13265	0.28	-0.7
3,296,278	-		CA265_RS13265	0.33	-1.1
3,296,348	-		CA265_RS13265	0.54	-0.1
3,296,443	-		CA265_RS13265	0.84	+0.7
3,296,557	-				-0.7
3,296,558	+				-1.2
3,296,559	-				-1.4
3,296,559	-				-0.4
3,296,579	+				-0.4
3,296,631	-		CA265_RS13270	0.14	-0.2
3,296,637	+		CA265_RS13270	0.15	+0.4
3,296,638	+		CA265_RS13270	0.15	-0.1
3,296,790	+		CA265_RS13270	0.48	+0.1
3,296,797	+		CA265_RS13270	0.49	+1.2
3,296,835	-		CA265_RS13270	0.58	-0.8
3,296,891	+		CA265_RS13270	0.70	-1.3
3,296,948	-		CA265_RS13270	0.82	-0.2
3,296,954	-		CA265_RS13270	0.83	+0.8
3,296,954	-		CA265_RS13270	0.83	-0.6
3,297,033	+				-0.3
3,297,034	-				-0.1
3,297,034	-				-0.1
3,297,034	-				-1.2
3,297,043	+				-1.0
3,297,053	+				-0.2
3,297,064	-				-0.7
3,297,069	-				+0.5
3,297,069	-				-0.2
3,297,084	+				+2.0
3,297,085	-				-0.2
3,297,116	+				+0.4
3,297,116	+				-2.1
3,297,203	-				-0.8
3,297,213	-				+0.5
3,297,213	-				-0.3
3,297,225	+				-2.6
3,297,235	+				-3.0
3,297,237	+				-0.9
3,297,238	-				+0.4
3,297,282	+				-0.6
3,297,349	+		CA265_RS13275	0.12	-1.9
3,297,349	+		CA265_RS13275	0.12	-1.2
3,297,416	-		CA265_RS13275	0.18	-3.5
3,297,434	-		CA265_RS13275	0.20	-0.8
3,297,529	-		CA265_RS13275	0.28	+0.7
3,297,552	+		CA265_RS13275	0.30	-0.9
3,297,599	-		CA265_RS13275	0.35	-1.1
3,297,605	-		CA265_RS13275	0.35	-0.2
3,297,620	-		CA265_RS13275	0.37	+0.4
3,297,704	+		CA265_RS13275	0.44	+0.5
3,297,704	+		CA265_RS13275	0.44	+0.7
3,297,745	+		CA265_RS13275	0.48	-0.5
3,297,812	-		CA265_RS13275	0.54	+0.6
3,297,830	+		CA265_RS13275	0.56	-0.7
3,297,831	-		CA265_RS13275	0.56	+0.3
3,297,886	-		CA265_RS13275	0.61	+1.2
3,297,967	+		CA265_RS13275	0.68	-1.6
3,297,972	-		CA265_RS13275	0.68	+0.4
3,298,049	-		CA265_RS13275	0.75	-1.6
3,298,071	-		CA265_RS13275	0.77	-0.4
3,298,215	+				-1.1
3,298,216	-				+0.2
3,298,216	-				+0.6
3,298,217	-				-0.9
3,298,252	-				+0.2
3,298,257	+				-2.4
3,298,258	-				-0.7
3,298,258	-				-0.4
3,298,275	+				-1.8
3,298,430	+				-1.7
3,298,573	+				-0.2
3,298,574	-				-1.1
3,298,583	+				-1.4
3,298,583	+				+1.1
3,298,587	+				+0.1
3,298,587	+				-0.2
3,298,588	-				+0.4
3,298,635	+				+0.0
3,298,635	+				-0.3
3,298,668	+				+3.2
3,298,669	-				-1.8
3,298,675	+				+0.5
3,298,682	+				-0.8
3,298,683	-				-0.9
3,298,698	-				-0.6
3,298,711	+				-0.8
3,298,757	-		CA265_RS13280	0.12	+0.6
3,298,799	+		CA265_RS13280	0.19	+0.5
3,298,799	+		CA265_RS13280	0.19	-1.0
3,298,800	-		CA265_RS13280	0.19	-1.8
3,298,800	-		CA265_RS13280	0.19	+0.5
3,298,800	-		CA265_RS13280	0.19	-0.7
3,298,986	+		CA265_RS13280	0.50	-0.9
3,298,988	+		CA265_RS13280	0.50	-0.5
3,298,989	-		CA265_RS13280	0.50	-0.7
3,298,989	-		CA265_RS13280	0.50	-0.1
3,299,103	+		CA265_RS13280	0.69	-2.2
3,299,129	-		CA265_RS13280	0.73	-0.6
3,299,144	+		CA265_RS13280	0.75	-2.4
3,299,144	+		CA265_RS13280	0.75	-0.5
3,299,145	-		CA265_RS13280	0.75	-0.4
3,299,145	-		CA265_RS13280	0.75	-0.3
3,299,145	-		CA265_RS13280	0.75	+1.1
3,299,149	-		CA265_RS13280	0.76	-0.2
3,299,158	-		CA265_RS13280	0.78	-0.1
3,299,281	-				-0.3