Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09835

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
2,425,744	-		CA265_RS09830	0.59	-0.4
2,425,749	+		CA265_RS09830	0.59	-0.1
2,425,749	+		CA265_RS09830	0.59	+0.2
2,425,759	+		CA265_RS09830	0.60	-0.6
2,425,764	+		CA265_RS09830	0.60	-0.0
2,425,765	-		CA265_RS09830	0.60	-0.6
2,425,843	+		CA265_RS09830	0.64	+0.2
2,425,875	+		CA265_RS09830	0.65	+0.4
2,425,904	-		CA265_RS09830	0.67	-0.2
2,425,929	+		CA265_RS09830	0.68	+0.1
2,425,939	-		CA265_RS09830	0.68	-0.3
2,425,951	+		CA265_RS09830	0.69	+0.5
2,425,952	-		CA265_RS09830	0.69	-2.2
2,425,952	-		CA265_RS09830	0.69	+0.1
2,425,960	+		CA265_RS09830	0.69	+0.2
2,425,992	+		CA265_RS09830	0.71	+0.3
2,426,067	-		CA265_RS09830	0.75	-0.0
2,426,227	+		CA265_RS09830	0.82	+0.5
2,426,285	-		CA265_RS09830	0.85	+0.2
2,426,326	+		CA265_RS09830	0.87	+0.1
2,426,464	+				+0.4
2,426,467	-				+0.0
2,426,540	+				-1.2
2,426,583	+				+0.6
2,426,641	+				-0.4
2,426,740	+				+0.4
2,426,795	+		CA265_RS09835	0.17	+0.2
2,426,845	+		CA265_RS09835	0.25	-0.1
2,426,872	+		CA265_RS09835	0.29	-0.3
2,426,945	+		CA265_RS09835	0.40	+0.1
2,427,231	-		CA265_RS09835	0.86	-1.2
2,427,231	-		CA265_RS09835	0.86	-1.0
2,427,419	+				-1.2
2,427,439	+				-0.0
2,427,561	-		CA265_RS09840	0.34	-1.0
2,427,690	-		CA265_RS09840	0.60	-1.0
2,427,690	-		CA265_RS09840	0.60	-1.0
2,427,823	+		CA265_RS09840	0.87	-0.5
2,427,824	-		CA265_RS09840	0.87	+2.0
2,427,867	+				-0.0
2,427,869	+				-0.5
2,427,869	+				-1.5
2,427,882	-				-1.3
2,427,886	-				-0.2
2,427,893	-				-3.2
2,427,938	-				-0.4
2,427,938	-				+1.2
2,427,951	+				-0.1
2,428,009	+				+0.1
2,428,010	-				+0.1
2,428,116	+		CA265_RS09845	0.11	-2.1
2,428,131	+		CA265_RS09845	0.14	+0.4
2,428,132	-		CA265_RS09845	0.15	+0.1
2,428,132	-		CA265_RS09845	0.15	-0.2
2,428,132	-		CA265_RS09845	0.15	-0.7
2,428,139	+		CA265_RS09845	0.16	-0.7
2,428,140	-		CA265_RS09845	0.16	+0.4
2,428,143	+		CA265_RS09845	0.17	-0.3
2,428,149	+		CA265_RS09845	0.18	-0.0
2,428,150	-		CA265_RS09845	0.19	-0.5
2,428,172	-		CA265_RS09845	0.23	+0.2
2,428,189	-		CA265_RS09845	0.27	-0.3
2,428,307	-		CA265_RS09845	0.54	+0.2