Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26365 and AZOBR_RS26370 are separated by 185 nucleotides AZOBR_RS26370 and AZOBR_RS26375 are separated by 42 nucleotides
AZOBR_RS26365: AZOBR_RS26365 - cytosine deaminase, at 61,807 to 63,078
_RS26365
AZOBR_RS26370: AZOBR_RS26370 - alpha/beta hydrolase, at 63,264 to 64,028
_RS26370
AZOBR_RS26375: AZOBR_RS26375 - hypothetical protein, at 64,071 to 64,952
_RS26375
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 62.330 kb on + strand, within AZOBR_RS26365 at 62.538 kb on - strand, within AZOBR_RS26365 at 63.508 kb on + strand, within AZOBR_RS26370 at 63.626 kb on + strand, within AZOBR_RS26370 at 63.627 kb on - strand, within AZOBR_RS26370 at 63.627 kb on - strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.784 kb on - strand, within AZOBR_RS26370 at 63.784 kb on - strand, within AZOBR_RS26370 at 63.784 kb on - strand, within AZOBR_RS26370 at 64.028 kb on + strand at 64.029 kb on - strand at 64.311 kb on + strand, within AZOBR_RS26375 at 64.407 kb on - strand, within AZOBR_RS26375 at 64.454 kb on - strand, within AZOBR_RS26375 at 64.454 kb on - strand, within AZOBR_RS26375 at 64.471 kb on + strand, within AZOBR_RS26375 at 64.702 kb on + strand, within AZOBR_RS26375 at 64.702 kb on + strand, within AZOBR_RS26375 at 64.819 kb on + strand, within AZOBR_RS26375
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 62,330 + AZOBR_RS26365 0.41 +1.4 62,538 - AZOBR_RS26365 0.57 +1.0 63,508 + AZOBR_RS26370 0.32 -1.4 63,626 + AZOBR_RS26370 0.47 +0.1 63,627 - AZOBR_RS26370 0.47 +0.0 63,627 - AZOBR_RS26370 0.47 -1.5 63,783 + AZOBR_RS26370 0.68 +2.4 63,783 + AZOBR_RS26370 0.68 -1.9 63,783 + AZOBR_RS26370 0.68 -1.0 63,783 + AZOBR_RS26370 0.68 -0.2 63,784 - AZOBR_RS26370 0.68 -1.8 63,784 - AZOBR_RS26370 0.68 +0.8 63,784 - AZOBR_RS26370 0.68 -0.9 64,028 + +0.0 64,029 - -1.4 64,311 + AZOBR_RS26375 0.27 -1.0 64,407 - AZOBR_RS26375 0.38 +0.5 64,454 - AZOBR_RS26375 0.43 +2.2 64,454 - AZOBR_RS26375 0.43 +0.9 64,471 + AZOBR_RS26375 0.45 +0.2 64,702 + AZOBR_RS26375 0.72 -2.3 64,702 + AZOBR_RS26375 0.72 -1.3 64,819 + AZOBR_RS26375 0.85 +1.0
Or see this region's nucleotide sequence